Miyakogusa Predicted Gene

Lj0g3v0185379.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0185379.1 Non Chatacterized Hit- tr|A3IM47|A3IM47_9CHRO
Putative uncharacterized protein OS=Cyanothece sp.
CCY,37.21,0.048,seg,NULL,CUFF.11778.1
         (327 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g30240.1                                                        61   2e-09

>Glyma13g30240.1 
          Length = 162

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/89 (59%), Positives = 63/89 (70%)

Query: 120 MSREDHGGAGFTNVPDAECAVAGRGCEYIXXXXXXXXXXXXXXMLLEGSDRGGAVESPEL 179
           +  EDHGGAG  +VPDAE AVAG G E +              +LLEG+D GGAVE PEL
Sbjct: 1   VGGEDHGGAGLADVPDAEGAVAGGGGEDVGVAGVPDGGVDAVGVLLEGADAGGAVEGPEL 60

Query: 180 DGVIPGSRDEGVTADGVVIGGVNLAGMFL 208
           DGV+PG  +EGVTADGVV+GGV+LAG+FL
Sbjct: 61  DGVVPGGGEEGVTADGVVVGGVDLAGVFL 89