Miyakogusa Predicted Gene

Lj0g3v0185319.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0185319.1 Non Chatacterized Hit- tr|B8ALH3|B8ALH3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,61.54,3e-19,seg,NULL; Mog1p/PsbP-like,Mog1/PsbP/DUF1795,
alpha/beta/alpha sandwich; no description,Mog1/PsbP, al,CUFF.11768.1
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g43690.1                                                       235   9e-63
Glyma20g23100.1                                                       235   1e-62
Glyma20g38370.1                                                       211   2e-55
Glyma18g09270.1                                                        70   7e-13
Glyma02g10540.2                                                        62   2e-10
Glyma02g10540.1                                                        60   7e-10
Glyma18g52340.1                                                        58   3e-09

>Glyma10g43690.1 
          Length = 234

 Score =  235 bits (600), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 111/145 (76%), Positives = 122/145 (84%)

Query: 1   MAVSSCSLSWTSPCVSHKLNLPHSNHLPRITSTSHSNNVSCAXXXXXXXXXHSQRRLLLL 60
           MAVSSCSLSW SPC+SHKLNLPH+N LPR T+TS SN V CA           QRR LLL
Sbjct: 1   MAVSSCSLSWISPCLSHKLNLPHTNCLPRNTATSSSNTVFCALETNPRGEIFCQRRPLLL 60

Query: 61  GIGAITANLQPTRLLFAEEIPDRYRAFVDYSDGYSYVYPSDWKEFDFRAHDSAFKDRYLQ 120
           G+GA+TANLQP  L+FA+E PDRYRAFVDY DGYSYVYP DWKEFDFRAHDSAFKDRYLQ
Sbjct: 61  GVGALTANLQPINLVFAQEKPDRYRAFVDYEDGYSYVYPIDWKEFDFRAHDSAFKDRYLQ 120

Query: 121 LQNVRVRFLPTEKKDIRDMGPIEEV 145
           LQNVRVRF+PTEKKDIR++GP+EEV
Sbjct: 121 LQNVRVRFIPTEKKDIRELGPMEEV 145


>Glyma20g23100.1 
          Length = 234

 Score =  235 bits (600), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 111/145 (76%), Positives = 121/145 (83%)

Query: 1   MAVSSCSLSWTSPCVSHKLNLPHSNHLPRITSTSHSNNVSCAXXXXXXXXXHSQRRLLLL 60
           M VSSCSLSW SPC+SHKLNLPH+N LPR  +TS SN V C          H +RR LLL
Sbjct: 1   MVVSSCSLSWISPCLSHKLNLPHTNCLPRNIATSSSNTVFCELDTTPSGESHCRRRPLLL 60

Query: 61  GIGAITANLQPTRLLFAEEIPDRYRAFVDYSDGYSYVYPSDWKEFDFRAHDSAFKDRYLQ 120
           GIGA+TANLQPT L+FA+E PDRYRAFVDY DGYSYVYP DWKEFDFRAHDSAFKDRYLQ
Sbjct: 61  GIGALTANLQPTNLVFAQEKPDRYRAFVDYEDGYSYVYPIDWKEFDFRAHDSAFKDRYLQ 120

Query: 121 LQNVRVRFLPTEKKDIRDMGPIEEV 145
           LQNVRVRF+PTEKKDIRD+GP+EEV
Sbjct: 121 LQNVRVRFIPTEKKDIRDLGPMEEV 145


>Glyma20g38370.1 
          Length = 231

 Score =  211 bits (538), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 100/141 (70%), Positives = 114/141 (80%)

Query: 5   SCSLSWTSPCVSHKLNLPHSNHLPRITSTSHSNNVSCAXXXXXXXXXHSQRRLLLLGIGA 64
           + SLSW SPC+SHKLNLPHSN LPR T+TS ++ V CA         H QRR LLLGIGA
Sbjct: 2   AISLSWISPCLSHKLNLPHSNCLPRNTATSSTSTVFCALETTPGGESHCQRRPLLLGIGA 61

Query: 65  ITANLQPTRLLFAEEIPDRYRAFVDYSDGYSYVYPSDWKEFDFRAHDSAFKDRYLQLQNV 124
           +TANLQPT L+FA+E  DR R F+DY DGYSY+YP DWKEFDFRA DSAFKDRYLQLQNV
Sbjct: 62  LTANLQPTNLVFAQEKSDRCRVFLDYEDGYSYIYPIDWKEFDFRALDSAFKDRYLQLQNV 121

Query: 125 RVRFLPTEKKDIRDMGPIEEV 145
           RV+ +PTEKKDIRD+GP+EEV
Sbjct: 122 RVKSIPTEKKDIRDLGPMEEV 142


>Glyma18g09270.1 
          Length = 42

 Score = 70.1 bits (170), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/36 (86%), Positives = 32/36 (88%)

Query: 90  YSDGYSYVYPSDWKEFDFRAHDSAFKDRYLQLQNVR 125
           Y DGYSYVYP DWKEFDFRA DSAFKDRYLQLQ V+
Sbjct: 1   YEDGYSYVYPVDWKEFDFRALDSAFKDRYLQLQIVK 36


>Glyma02g10540.2 
          Length = 218

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 38/70 (54%)

Query: 76  FAEEIPDRYRAFVDYSDGYSYVYPSDWKEFDFRAHDSAFKDRYLQLQNVRVRFLPTEKKD 135
           FA E    +   +D  DGYS++YP  W+E      D  FKD    L+NV V  +PT K+D
Sbjct: 90  FAAENKKGFLPVLDKKDGYSFLYPFGWQEVVIEGQDKVFKDVIEPLENVSVNVIPTGKQD 149

Query: 136 IRDMGPIEEV 145
           I + G  +EV
Sbjct: 150 ITEFGSPQEV 159


>Glyma02g10540.1 
          Length = 248

 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 11/99 (11%)

Query: 54  QRRLLLLGIGAITANLQPTRLLF-------AEEIPDRYRAFVDYSDGYSYVYPSDWKEFD 106
           QRR  ++ +G       P   LF       A E    +   +D  DGYS++YP  W+E  
Sbjct: 65  QRRRQVIAVGTTA----PLVFLFNQHSNSFAAENKKGFLPVLDKKDGYSFLYPFGWQEVV 120

Query: 107 FRAHDSAFKDRYLQLQNVRVRFLPTEKKDIRDMGPIEEV 145
               D  FKD    L+NV V  +PT K+DI + G  +EV
Sbjct: 121 IEGQDKVFKDVIEPLENVSVNVIPTGKQDITEFGSPQEV 159


>Glyma18g52340.1 
          Length = 235

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 11/99 (11%)

Query: 54  QRRLLLLGIGAITANLQPTRLLF-------AEEIPDRYRAFVDYSDGYSYVYPSDWKEFD 106
           QRR  ++  G       P   LF       A E    +   +D  DGYS++YP  W+E  
Sbjct: 52  QRRRQVIAFGTTA----PLVFLFNQHSNSCAAENKKGFLPVLDKKDGYSFLYPFGWQEVV 107

Query: 107 FRAHDSAFKDRYLQLQNVRVRFLPTEKKDIRDMGPIEEV 145
               D  FKD    L+NV V  +PT K+DI + G  +EV
Sbjct: 108 IEGQDKVFKDVIEPLENVSVNVIPTGKQDITEFGSPQEV 146