Miyakogusa Predicted Gene

Lj0g3v0184509.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0184509.1 Non Chatacterized Hit- tr|D8TS51|D8TS51_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,39.39,1e-18,DUF3054,Protein of unknown function DUF3054;
seg,NULL,CUFF.11716.1
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g35070.1                                                       361   e-100
Glyma17g35070.3                                                       160   1e-39
Glyma17g35070.2                                                       160   1e-39

>Glyma17g35070.1 
          Length = 268

 Score =  361 bits (926), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/265 (72%), Positives = 204/265 (76%), Gaps = 7/265 (2%)

Query: 6   QAPC-GAMFAKCPSLLSSAKFITAKSSP-FSNPAPKFITRR-SPIRPLHLTLAKAEGNLD 62
           QAPC GAMF+KC SLLS  KFIT  + P FSNP P FITRR S  RP HLTLAKAEGNL 
Sbjct: 8   QAPCVGAMFSKCCSLLSLPKFITVTNPPTFSNPVPNFITRRISSTRPFHLTLAKAEGNL- 66

Query: 63  XXXXXXXXXXXXXXXXXXXFANDPTVFVGGEDVPLEGVIQFEKPSSSARIEKWXXXXXXX 122
                              FA D TVFV G+DVPLEGVIQFEKP+SS   EKW       
Sbjct: 67  ---DSDSPSTSTSSPSPSPFATDQTVFVTGKDVPLEGVIQFEKPASSPPFEKWGRVALLA 123

Query: 123 XXXXXXXXXFATIGRFSHGLSILDLETLRTADPFIAGWFLGAYFLGGFGEDGRGMKGLPK 182
                    F+TIGR+SHGLS+LDLETLRTADPFIAGWFLGAYFLGGFGEDGRGM GL K
Sbjct: 124 GADVLALFVFSTIGRYSHGLSVLDLETLRTADPFIAGWFLGAYFLGGFGEDGRGMNGLSK 183

Query: 183 GVIATAKSWAVGIPIGIGIRAATSGHFPNYGFIFVSLGSTAVLLITFRALLYTILPVDSS 242
           GV+ATAKSWAVGIPIGI I+AATSGH PNYGF+FVSLGSTAVLL+TFRALLYTILPVD+S
Sbjct: 184 GVVATAKSWAVGIPIGIVIKAATSGHLPNYGFVFVSLGSTAVLLVTFRALLYTILPVDNS 243

Query: 243 KKSDVYRRGSPFELFELLTSLVRRW 267
           KKSD YRRGSPFELFELLTSLVRRW
Sbjct: 244 KKSDDYRRGSPFELFELLTSLVRRW 268


>Glyma17g35070.3 
          Length = 202

 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/156 (59%), Positives = 100/156 (64%), Gaps = 7/156 (4%)

Query: 6   QAPC-GAMFAKCPSLLSSAKFITAKSSP-FSNPAPKFITRR-SPIRPLHLTLAKAEGNLD 62
           QAPC GAMF+KC SLLS  KFIT  + P FSNP P FITRR S  RP HLTLAKAEGNL 
Sbjct: 8   QAPCVGAMFSKCCSLLSLPKFITVTNPPTFSNPVPNFITRRISSTRPFHLTLAKAEGNL- 66

Query: 63  XXXXXXXXXXXXXXXXXXXFANDPTVFVGGEDVPLEGVIQFEKPSSSARIEKWXXXXXXX 122
                              FA D TVFV G+DVPLEGVIQFEKP+SS   EKW       
Sbjct: 67  ---DSDSPSTSTSSPSPSPFATDQTVFVTGKDVPLEGVIQFEKPASSPPFEKWGRVALLA 123

Query: 123 XXXXXXXXXFATIGRFSHGLSILDLETLRTADPFIA 158
                    F+TIGR+SHGLS+LDLETLRTADPFIA
Sbjct: 124 GADVLALFVFSTIGRYSHGLSVLDLETLRTADPFIA 159


>Glyma17g35070.2 
          Length = 202

 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/156 (59%), Positives = 100/156 (64%), Gaps = 7/156 (4%)

Query: 6   QAPC-GAMFAKCPSLLSSAKFITAKSSP-FSNPAPKFITRR-SPIRPLHLTLAKAEGNLD 62
           QAPC GAMF+KC SLLS  KFIT  + P FSNP P FITRR S  RP HLTLAKAEGNL 
Sbjct: 8   QAPCVGAMFSKCCSLLSLPKFITVTNPPTFSNPVPNFITRRISSTRPFHLTLAKAEGNL- 66

Query: 63  XXXXXXXXXXXXXXXXXXXFANDPTVFVGGEDVPLEGVIQFEKPSSSARIEKWXXXXXXX 122
                              FA D TVFV G+DVPLEGVIQFEKP+SS   EKW       
Sbjct: 67  ---DSDSPSTSTSSPSPSPFATDQTVFVTGKDVPLEGVIQFEKPASSPPFEKWGRVALLA 123

Query: 123 XXXXXXXXXFATIGRFSHGLSILDLETLRTADPFIA 158
                    F+TIGR+SHGLS+LDLETLRTADPFIA
Sbjct: 124 GADVLALFVFSTIGRYSHGLSVLDLETLRTADPFIA 159