Miyakogusa Predicted Gene

Lj0g3v0182159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0182159.1 Non Chatacterized Hit- tr|B9RB21|B9RB21_RICCO
Ataxia telangiectasia mutated, putative OS=Ricinus com,57,0,PREDICTED:
HYPOTHETICAL PROTEIN, PARTIAL,NULL; ATAXIA TELANGIECTASIA MUTATED
(ATM)-RELATED,NULL; seg,CUFF.11609.1
         (1431 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g19350.1                                                        64   2e-09

>Glyma06g19350.1 
          Length = 249

 Score = 63.5 bits (153), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/29 (100%), Positives = 29/29 (100%)

Query: 1353 LPDHIEILVSAVTRINEPDSLYGILQSHK 1381
            LPDHIEILVSAVTRINEPDSLYGILQSHK
Sbjct: 221  LPDHIEILVSAVTRINEPDSLYGILQSHK 249