Miyakogusa Predicted Gene

Lj0g3v0182039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0182039.1 CUFF.11583.1
         (71 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45440.1                                                       130   3e-31

>Glyma08g45440.1 
          Length = 71

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 66/71 (92%)

Query: 1  MASKDSSLPYPSAARISDSQCFPQYTASLKCLEEFHSDKSKCQEHFDVYKECKKKEREAR 60
          MASK  + PYPSAARISDSQCFPQYTASLKCLEEF+SDKSKCQEHFDVYK CKKKEREAR
Sbjct: 1  MASKAPTAPYPSAARISDSQCFPQYTASLKCLEEFNSDKSKCQEHFDVYKMCKKKEREAR 60

Query: 61 LERNKTRSLFS 71
          LERNK RSLFS
Sbjct: 61 LERNKNRSLFS 71