Miyakogusa Predicted Gene

Lj0g3v0181699.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0181699.1 Non Chatacterized Hit- tr|K4C5K6|K4C5K6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.93,0.000000000000006,seg,NULL,CUFF.11550.1
         (187 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g02660.1                                                        74   1e-13
Glyma11g35750.1                                                        73   1e-13

>Glyma18g02660.1 
          Length = 747

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 33/36 (91%), Positives = 34/36 (94%)

Query: 152 TSRIYDATAIGEPLAIGKEKGKVWEKLMNSRVVYWG 187
           TSRIYDAT IGEPLAIGKEKGKVWEKLMN+RVVY G
Sbjct: 138 TSRIYDATVIGEPLAIGKEKGKVWEKLMNARVVYLG 173



 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 47/78 (60%), Gaps = 13/78 (16%)

Query: 1  MKPHTQAS-FATGPPHVTYFR---RARASPSKTHLPLPHH-----EVRRVWTAKRRRVSL 51
          MKPHT AS F T  PHV YFR    ARA+PS      PH      E RRV TAKRRRVSL
Sbjct: 1  MKPHTPASSFVTRLPHVPYFRGATAARAAPSDP----PHDAPGGLEFRRVSTAKRRRVSL 56

Query: 52 SVRHPNRVVAAWKPEHSD 69
          SV H +RV AA  P  SD
Sbjct: 57 SVCHASRVTAASNPGGSD 74


>Glyma11g35750.1 
          Length = 748

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/36 (88%), Positives = 34/36 (94%)

Query: 152 TSRIYDATAIGEPLAIGKEKGKVWEKLMNSRVVYWG 187
           TSRIYDAT IGEPLAIGKEKGK+WEKLMN+RVVY G
Sbjct: 139 TSRIYDATVIGEPLAIGKEKGKIWEKLMNARVVYLG 174



 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 49/79 (62%), Gaps = 15/79 (18%)

Query: 1  MKPHTQAS-FATGPPHVTYFR---RARASPSKTHLPLPHH------EVRRVWTAKRRRVS 50
          MKPHT AS FAT  PHV  FR    ARA+PS+     PHH      E RRV T+KRR ++
Sbjct: 1  MKPHTTASSFATSLPHVPCFRGTTAARATPSE-----PHHDSAGGLEFRRVSTSKRRLIN 55

Query: 51 LSVRHPNRVVAAWKPEHSD 69
          LSVRH +RV AA  P  SD
Sbjct: 56 LSVRHASRVTAASNPGGSD 74