Miyakogusa Predicted Gene

Lj0g3v0181439.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0181439.1 Non Chatacterized Hit- tr|I3S4V5|I3S4V5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.23,0,SpoU_methylase,tRNA/rRNA methyltransferase, SpoU; no
description,NULL; SUBFAMILY NOT NAMED,NULL; RNA,CUFF.11526.1
         (259 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g16210.1                                                       410   e-115

>Glyma08g16210.1 
          Length = 260

 Score =  410 bits (1053), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/262 (80%), Positives = 230/262 (87%), Gaps = 5/262 (1%)

Query: 1   MDITGLKSLNMGNPFRFRSKVSLFRPLFTSLHFKPI-THFSPRLCSFCSLNGSAE-TSKE 58
           MDIT  KSLN+  P  F SK S FR  F+  HFKP  T  SPR  S CSLNGSAE TSKE
Sbjct: 1   MDITAFKSLNIPFP-TFPSKFSPFR-PFSFFHFKPFRTPSSPRFISHCSLNGSAEITSKE 58

Query: 59  GSLPQGVGGAVKEASHSRILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGYKVDDT 118
           G+LP+GVG AV EAS S+ILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLG++VDDT
Sbjct: 59  GTLPRGVGEAVNEASSSKILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGFQVDDT 118

Query: 119 KLKRAGLDYWPYVVVKIHNSWEDFRDYFRQQEGEKRLLAFTKRGTKIHSEFSYKKGDYLL 178
           KLKRAGLDYWPYVVVKIH+SWEDF +YFRQQEGEKRLLAFTKRGTKIHSEFSY+KGDYL+
Sbjct: 119 KLKRAGLDYWPYVVVKIHDSWEDFHNYFRQQEGEKRLLAFTKRGTKIHSEFSYRKGDYLI 178

Query: 179 FGAETTGLPPEALLDCKTKPFGGGTLKIPMVETYVRCLNLSVSVGIALYEASRQLNYEQF 238
           FG+ET+GLPPEALLDCKT+PFGGGT+KIPMVETYVRCLNLSVSVGIALYEASRQLNYE  
Sbjct: 179 FGSETSGLPPEALLDCKTEPFGGGTIKIPMVETYVRCLNLSVSVGIALYEASRQLNYESL 238

Query: 239 QIPSETCIP-TEETLITEDILA 259
           Q+PSE+CI  TEE+ I EDI A
Sbjct: 239 QVPSESCIDTTEESFIAEDIFA 260