Miyakogusa Predicted Gene

Lj0g3v0181179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0181179.1 Non Chatacterized Hit- tr|Q8RX24|Q8RX24_ARATH
Putative uncharacterized protein At4g02480
OS=Arabidop,41.07,0.00000004, ,CUFF.11509.1
         (127 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g13850.1                                                       176   6e-45
Glyma05g03270.1                                                       129   8e-31
Glyma05g03270.2                                                       129   1e-30
Glyma11g23920.1                                                       127   4e-30
Glyma06g17940.1                                                       103   5e-23
Glyma10g02410.1                                                        55   2e-08
Glyma02g17410.1                                                        52   2e-07
Glyma10g02400.1                                                        51   3e-07
Glyma02g17400.1                                                        50   4e-07
Glyma04g37110.1                                                        49   2e-06

>Glyma17g13850.1 
          Length = 1054

 Score =  176 bits (446), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 97/127 (76%), Positives = 104/127 (81%), Gaps = 3/127 (2%)

Query: 1   MLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSI 60
           ML KALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEK    +K SPT  D+ R +
Sbjct: 303 MLVKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKSFGCTKLSPTE-DMARIM 361

Query: 61  DPSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKT-GFKLGDRVKYSCSSSGVL 119
           DP ASE +TPS SNAPT  G ESQPKLETDN PSTSGT K+  FKLGDRVK+SCSSS  +
Sbjct: 362 DPLASEIETPSPSNAPTSYGFESQPKLETDNMPSTSGTAKSCSFKLGDRVKFSCSSSCGV 421

Query: 120 YQTSSPR 126
           YQT SPR
Sbjct: 422 YQT-SPR 427


>Glyma05g03270.1 
          Length = 987

 Score =  129 bits (324), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/107 (69%), Positives = 78/107 (72%), Gaps = 15/107 (14%)

Query: 1   MLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSI 60
           ML KALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEK    +K +          
Sbjct: 263 MLVKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKSFRCTKLT---------- 312

Query: 61  DPSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKT-GFKLG 106
               SET+TPS SNAPT  G ESQPKLETDN PSTSGT K+  FKL 
Sbjct: 313 ----SETETPSPSNAPTSYGFESQPKLETDNTPSTSGTAKSCSFKLA 355


>Glyma05g03270.2 
          Length = 903

 Score =  129 bits (323), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/107 (69%), Positives = 78/107 (72%), Gaps = 15/107 (14%)

Query: 1   MLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSI 60
           ML KALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEK    +K +          
Sbjct: 263 MLVKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKSFRCTKLT---------- 312

Query: 61  DPSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKT-GFKLG 106
               SET+TPS SNAPT  G ESQPKLETDN PSTSGT K+  FKL 
Sbjct: 313 ----SETETPSPSNAPTSYGFESQPKLETDNTPSTSGTAKSCSFKLA 355


>Glyma11g23920.1 
          Length = 419

 Score =  127 bits (318), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 94/158 (59%), Gaps = 33/158 (20%)

Query: 2   LAKALAKYFGAKLLIFDSHLL---LGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGR 58
           + +   K+    L++  S+L+     GLSSKEAELLKDG + +K C ++K SPTATD+ R
Sbjct: 131 IRRCWQKHLQNTLVLNSSYLIAIHFWGLSSKEAELLKDGFSVDKSCGYAKLSPTATDMAR 190

Query: 59  SIDPSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKTG-FKL------------ 105
            +DPSASE +T  SSNAPTP G ESQPKLE DN PSTSGTTK   FKL            
Sbjct: 191 CMDPSASEPETTHSSNAPTPYGFESQPKLEADNVPSTSGTTKNCVFKLGMCASYLYLRSL 250

Query: 106 --------------GDRVKYSCSSSGVLY--QTSSPRY 127
                         GDRVKYS SSSG LY  QT S RY
Sbjct: 251 NLSQRLTFSIYNSAGDRVKYS-SSSGGLYQLQTISSRY 287


>Glyma06g17940.1 
          Length = 1221

 Score =  103 bits (257), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/73 (73%), Positives = 63/73 (86%), Gaps = 1/73 (1%)

Query: 1   MLAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSI 60
           MLAKALAKYFGAKLLIFDSH LLGGLSSKEAELLKDG NAEK C+++K SP+++D+ R +
Sbjct: 452 MLAKALAKYFGAKLLIFDSHSLLGGLSSKEAELLKDGFNAEKFCAYAK-SPSSSDMARCM 510

Query: 61  DPSASETDTPSSS 73
           DPSAS+    SSS
Sbjct: 511 DPSASDRVKYSSS 523


>Glyma10g02410.1 
          Length = 1109

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 12/110 (10%)

Query: 2   LAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSID 61
           L+KAL K+FGA+LLI DS  L GG  SKE +  K+   AEKP  FS++    T + +   
Sbjct: 368 LSKALVKHFGARLLIVDSLSLPGGSPSKEVDSAKESYCAEKPSVFSRKKNLHTAMLQHKK 427

Query: 62  PSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKTGFKLGDRVKY 111
           P+       SS NA    G    P L   +A S   T K G  L DRVK+
Sbjct: 428 PA-------SSVNAEIIGG----PML-ISSASSKGTTLKKGILLCDRVKF 465


>Glyma02g17410.1 
          Length = 925

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 11/112 (9%)

Query: 2   LAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSID 61
           L KALAK+FGA+LLI DS  L GG SSKE +  K+    E+P S   +  + T   +   
Sbjct: 179 LCKALAKHFGARLLIVDSLSLPGGASSKEVDSAKESSRPERPSSVCAKRSSQTTTLQHKK 238

Query: 62  PSASETDTPSSSNAPTPCG--LESQPKLETDNAPSTSGTTKTGFKLGDRVKY 111
           P+       SS +A    G  L SQ  L+ +   ST+ +  T  K GDRVK+
Sbjct: 239 PA-------SSVDAEIVGGSTLSSQAMLKQE--VSTASSKGTTLKEGDRVKF 281


>Glyma10g02400.1 
          Length = 1188

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 9/111 (8%)

Query: 2   LAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCS-FSKQSPTATDIGRSI 60
           L KALAK+FGA+LLI DS  L GG  SKE +  K+    EKP S F+K+S     +    
Sbjct: 442 LCKALAKHFGARLLIVDSLSLPGGAPSKEVDSAKESSRPEKPSSVFTKRSSQTATLQHKK 501

Query: 61  DPSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKTGFKLGDRVKY 111
             S+ + +    S       + SQ  L+ +   ST+ +  T  K GDRVK+
Sbjct: 502 PASSVDAEIVGGST------ISSQAMLKQE--VSTASSKGTTLKEGDRVKF 544


>Glyma02g17400.1 
          Length = 1106

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 58/110 (52%), Gaps = 16/110 (14%)

Query: 2   LAKALAKYFGAKLLIFDSHLLLGGLSSKEAELLKDGLNAEKPCSFSKQSPTATDIGRSID 61
           L+KAL K+FGA+LLI DS  L GG  SKE +  K+   AEKP  FS++    T + +   
Sbjct: 369 LSKALVKHFGARLLIVDSLSLPGGSPSKEVDSAKESSGAEKPSVFSRKRNFQTAMLQHKK 428

Query: 62  PSASETDTPSSSNAPTPCGLESQPKLETDNAPSTSGTTKTGFKLGDRVKY 111
           P+       SS NA    G    P L +  + S+ G T    + GDRVK+
Sbjct: 429 PA-------SSVNAEIIGG----PMLIS--SASSKGAT---LRKGDRVKF 462


>Glyma04g37110.1 
          Length = 939

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 64/146 (43%), Gaps = 28/146 (19%)

Query: 1   MLAKALAKYFGAKLLIFDSHLLLG----GLSSKEAELLKDGLNAEKP---CSFSKQSPTA 53
           MLAKALAKYFGAKLLIFDSH LLG    G +  E+  +   L    P    S SK     
Sbjct: 510 MLAKALAKYFGAKLLIFDSHSLLGHFFTGNTGDESTFIVSILYRVYPPRKLSCSKMDLVL 569

Query: 54  TD----IGRSIDPSA-----------SETDTPSSSNAPTPCGLESQPKLETDNAPSTSGT 98
           T+    + + + P              +  TP          L    KL   + P   G 
Sbjct: 570 TNPVAMLNKVLQPQTWPGAWIHQLVNQKRLTPQMHLLHMALSLNLSWKLIMYHLP--PGQ 627

Query: 99  TKTGFKLGDRVKYSCSSSGVLYQTSS 124
            K    + DRVKYS SSSG LYQ  +
Sbjct: 628 LKI---VCDRVKYS-SSSGGLYQLQT 649