Miyakogusa Predicted Gene

Lj0g3v0180849.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0180849.1 Non Chatacterized Hit- tr|F6HI07|F6HI07_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.68,5e-16,seg,NULL,CUFF.11485.1
         (158 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g33370.1                                                       114   6e-26
Glyma18g04870.1                                                       112   2e-25

>Glyma11g33370.1 
          Length = 226

 Score =  114 bits (284), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 74/114 (64%), Gaps = 10/114 (8%)

Query: 37  MAESTDSNGVYVDHEXXXXXXXXXXXXXXXRRRKHGLVTTETLPEVLNRLVTDILFPGPA 96
           MAE+++ NGVYVD E               + ++      ETLPEVLNR+ + ILFP PA
Sbjct: 1   MAETSNGNGVYVDEEEQEVV----------KLKQKTQRVKETLPEVLNRIASAILFPEPA 50

Query: 97  DDASLLRRIKASVAGNAPLLPEASRNSASHVIVWTRRGSPLRALLVISVRIIQF 150
              SLLRRIK SVA +APLLPEAS+NSA  V++WTRRG+P R L VISV  + F
Sbjct: 51  YSGSLLRRIKLSVADHAPLLPEASKNSARDVLLWTRRGTPFRPLFVISVGTVTF 104


>Glyma18g04870.1 
          Length = 227

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 74/114 (64%), Gaps = 9/114 (7%)

Query: 37  MAESTDSNGVYVDHEXXXXXXXXXXXXXXXRRRKHGLVTTETLPEVLNRLVTDILFPGPA 96
           MAE+++ NGVYVD E               + ++      ETLPEVLNR+ + ILF  PA
Sbjct: 1   MAENSNGNGVYVDEEEEEEEI---------KLKQKKQRLKETLPEVLNRIASAILFQEPA 51

Query: 97  DDASLLRRIKASVAGNAPLLPEASRNSASHVIVWTRRGSPLRALLVISVRIIQF 150
           D  SLLRRIK SVA NA LLPEASRNSA  V++WTRRG+P RAL VISV  + F
Sbjct: 52  DAGSLLRRIKVSVADNATLLPEASRNSARDVLIWTRRGTPFRALFVISVGTVTF 105