Miyakogusa Predicted Gene

Lj0g3v0177449.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0177449.1 tr|A9RIS8|A9RIS8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_114815,33.08,0.00003, ,CUFF.11206.1
         (213 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g09190.1                                                       300   8e-82

>Glyma02g09190.1 
          Length = 367

 Score =  300 bits (768), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 151/217 (69%), Positives = 174/217 (80%), Gaps = 10/217 (4%)

Query: 1   MVLTELAALYYSAVSDTDNSNNRWMKFSSNLPSKPRSPVLVGDSAFALCEVGSPWRSQWK 60
           MVLTELAALY    + T      W+KFSSNLPSKPRS +L+ DSAFALC+VGSPWR++WK
Sbjct: 157 MVLTELAALYCHRNTTT------WLKFSSNLPSKPRSSLLINDSAFALCDVGSPWRNRWK 210

Query: 61  LFTCRVAPALAKKAG--SRLERNEWGDVFDILKRPRLVRGA-GDRVLMVGGLKSSFSLNA 117
           LF+C +           S L+R+EWGDVFD+L RPRLVRG  G+ +LMVGGLKSSF+LNA
Sbjct: 211 LFSCTIKSTTTSVVPVWSPLDRHEWGDVFDVLNRPRLVRGGHGNFILMVGGLKSSFALNA 270

Query: 118 PCSTILILRLDLGTLEWDDAGRMPPEMFRCFQEAGKFKVFG-AGDRVCFSAKRIGKLALW 176
           PCSTIL+LRLDL  L WD+A RMPPEMFR F+E+ KFKVFG AGD VCFSAKRIGKLALW
Sbjct: 271 PCSTILVLRLDLDNLRWDEAARMPPEMFRAFRESTKFKVFGGAGDMVCFSAKRIGKLALW 330

Query: 177 DRNADQGAEWRWIDNVPGNGDGLYRGFVFEGRLDALP 213
           DR A +G EWRWIDN+P NG GLYRGFVFEGRL+A+P
Sbjct: 331 DRRASEGHEWRWIDNLPENGKGLYRGFVFEGRLNAVP 367