Miyakogusa Predicted Gene

Lj0g3v0176729.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0176729.1 Non Chatacterized Hit- tr|I1KAZ4|I1KAZ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57136
PE,40.19,0.0002,seg,NULL,CUFF.11148.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g13940.1                                                        51   5e-07

>Glyma06g13940.1 
          Length = 195

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 19/107 (17%)

Query: 53  SQQQPDHASLTLPMVGMNDEQQQQEKQHLPIPLQKSGLSTSNQPFQMNEQQHNLQAFFRQ 112
           +Q QPD ++L LP+  MND+QQ Q+ QHL + LQ            MNEQ + L  F  Q
Sbjct: 102 NQPQPDLSALNLPL-EMNDQQQLQQHQHLAMSLQ------------MNEQNYQLPHFLYQ 148

Query: 113 Q------LQHVPRTSESMYQASQTRLGSMTDAPPSNHFGSGMGPSWS 153
           Q      +   P  +  +YQASQTRL ++++ P S   GS  GP WS
Sbjct: 149 QQIIPGSMGGFPVANSGLYQASQTRLSNLSETPSSYQTGSDSGPGWS 195