Miyakogusa Predicted Gene

Lj0g3v0176719.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0176719.1 Non Chatacterized Hit- tr|I1KAZ4|I1KAZ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57136
PE,33.81,0.000000003,seg,NULL; SSXT,SSXT,CUFF.11147.1
         (204 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g13940.1                                                        52   6e-07

>Glyma06g13940.1 
          Length = 195

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 19/107 (17%)

Query: 104 SQQQPDHASLTLPMVGMNDEQQQQEKQHLPIPLQKSGLSTSNQPFQMNEQQHNLQAFFRQ 163
           +Q QPD ++L LP+  MND+QQ Q+ QHL + LQ            MNEQ + L  F  Q
Sbjct: 102 NQPQPDLSALNLPL-EMNDQQQLQQHQHLAMSLQ------------MNEQNYQLPHFLYQ 148

Query: 164 Q------LQHVPRTSESMYQASQTRLGSMTDAPPSNHFGSGMGPSWS 204
           Q      +   P  +  +YQASQTRL ++++ P S   GS  GP WS
Sbjct: 149 QQIIPGSMGGFPVANSGLYQASQTRLSNLSETPSSYQTGSDSGPGWS 195