Miyakogusa Predicted Gene

Lj0g3v0176709.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0176709.1 Non Chatacterized Hit- tr|G7J886|G7J886_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,95.24,0.00000000000001, ,CUFF.11143.1
         (64 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g40890.1                                                        77   4e-15
Glyma04g23990.1                                                        68   3e-12
Glyma18g23570.1                                                        63   7e-11
Glyma06g13950.1                                                        58   2e-09

>Glyma04g40890.1 
          Length = 72

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 38/44 (86%)

Query: 1  MGYVLRVRLASFFIGAATASFAGLYILHRDYKLAHQSFTQQVPS 44
          MGYV+RVRLASFF GAA ASF GLY LH+DYK+AHQSFTQQ+  
Sbjct: 1  MGYVMRVRLASFFTGAAVASFLGLYTLHKDYKVAHQSFTQQMND 44


>Glyma04g23990.1 
          Length = 68

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 34/38 (89%)

Query: 5  LRVRLASFFIGAATASFAGLYILHRDYKLAHQSFTQQV 42
          +RVRLASFF GAA ASF GLY LH+DYK+AHQSFTQQ+
Sbjct: 1  MRVRLASFFTGAAAASFLGLYTLHKDYKVAHQSFTQQM 38


>Glyma18g23570.1 
          Length = 63

 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 33/38 (86%)

Query: 5  LRVRLASFFIGAATASFAGLYILHRDYKLAHQSFTQQV 42
          +RVRLASFF GAA ASF GLY LH+DYK+ HQSFTQQ+
Sbjct: 1  MRVRLASFFTGAAAASFLGLYTLHKDYKVPHQSFTQQM 38


>Glyma06g13950.1 
          Length = 77

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/42 (66%), Positives = 32/42 (76%)

Query: 1  MGYVLRVRLASFFIGAATASFAGLYILHRDYKLAHQSFTQQV 42
          MG V+ VRLASFF GAA ASF GLY LH DYKLAH  + Q++
Sbjct: 6  MGCVIGVRLASFFTGAAAASFLGLYSLHNDYKLAHLYYIQRM 47