Miyakogusa Predicted Gene

Lj0g3v0175929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0175929.1 Non Chatacterized Hit- tr|B9FDC4|B9FDC4_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,54.29,0.000000000000001,UNCHARACTERIZED,NULL; CTL
TRANSPORTER,Choline transporter-like,CUFF.11080.1
         (208 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g35170.1                                                       380   e-106
Glyma13g35380.1                                                       378   e-105
Glyma12g23180.1                                                       374   e-104
Glyma06g38120.1                                                       372   e-103

>Glyma12g35170.1 
          Length = 696

 Score =  380 bits (976), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 172/210 (81%), Positives = 195/210 (92%), Gaps = 2/210 (0%)

Query: 1   MRGPLGAVVGRYPSSDGTTHLGGIIRHSRKCRDILVLVIFIAFWISMIVNSSFAFNKGNP 60
           MRGPLGAV+GRYPSSDGTTHLGGIIRH++KCRDI VLVIF+AFWI++IVNSSFAFN+GNP
Sbjct: 1   MRGPLGAVIGRYPSSDGTTHLGGIIRHNKKCRDIAVLVIFVAFWIALIVNSSFAFNRGNP 60

Query: 61  LMLTFVLDYNGNVCGDQH--EGLHELELKYWLNPYQVYQSGLKDSEFKLANARSICLLDC 118
           L LT+ LDY GNVCG +H  + L ELEL+YWL+P QVYQSGLKDS+FKLANARSICLLDC
Sbjct: 61  LRLTYGLDYKGNVCGQKHAVQDLRELELRYWLSPNQVYQSGLKDSQFKLANARSICLLDC 120

Query: 119 PNPPDDSLSWVCDYPEGDIRVSMNDWIDMNYDYYEFLTPEMKNSSLQLQGPCYPVIFPSI 178
           P P +DSL+WVCDYPEGDIRVS+NDWIDMNYDY+EFLTPEM+NSSLQLQGPCYPVIFPS+
Sbjct: 121 PIPSEDSLTWVCDYPEGDIRVSLNDWIDMNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSV 180

Query: 179 NVYWSCQFIARASNSSLTHWQKLGGVNINE 208
           NVYWSCQFI +ASN SL HW+++GGVNINE
Sbjct: 181 NVYWSCQFIVKASNVSLKHWRQMGGVNINE 210


>Glyma13g35380.1 
          Length = 696

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 172/210 (81%), Positives = 192/210 (91%), Gaps = 2/210 (0%)

Query: 1   MRGPLGAVVGRYPSSDGTTHLGGIIRHSRKCRDILVLVIFIAFWISMIVNSSFAFNKGNP 60
           MRGPLGAV+GRYPSSDGTTHLGGIIRH+RKCRDI  LVIF+AFWI+MIVNSSFAFN+GNP
Sbjct: 1   MRGPLGAVIGRYPSSDGTTHLGGIIRHNRKCRDIAFLVIFVAFWIAMIVNSSFAFNRGNP 60

Query: 61  LMLTFVLDYNGNVCGDQH--EGLHELELKYWLNPYQVYQSGLKDSEFKLANARSICLLDC 118
           L LT+ LDY GNVCG +H  + L ELEL+YWL+P QVYQSGLKDS+FKL NARSICLLDC
Sbjct: 61  LRLTYGLDYKGNVCGQKHAVQDLRELELRYWLSPNQVYQSGLKDSQFKLVNARSICLLDC 120

Query: 119 PNPPDDSLSWVCDYPEGDIRVSMNDWIDMNYDYYEFLTPEMKNSSLQLQGPCYPVIFPSI 178
           P P +DSL+WVCDYPEGDI VS+NDWIDMNYDY+EFLTPEM+NSSLQLQGPCYPVIFPS+
Sbjct: 121 PIPSEDSLTWVCDYPEGDIHVSLNDWIDMNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSV 180

Query: 179 NVYWSCQFIARASNSSLTHWQKLGGVNINE 208
           NVYWSCQFIA+ASN SL HWQ++GGV INE
Sbjct: 181 NVYWSCQFIAKASNVSLKHWQQMGGVTINE 210


>Glyma12g23180.1 
          Length = 699

 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 171/210 (81%), Positives = 192/210 (91%), Gaps = 2/210 (0%)

Query: 1   MRGPLGAVVGRYPSSDGTTHLGGIIRHSRKCRDILVLVIFIAFWISMIVNSSFAFNKGNP 60
           MRGPLGAV+GRYPSSDG T +GGIIRH+RKCRDI VLVIFIAFWI+MIVNSSFAFN+GNP
Sbjct: 1   MRGPLGAVIGRYPSSDGVTQMGGIIRHNRKCRDITVLVIFIAFWIAMIVNSSFAFNQGNP 60

Query: 61  LMLTFVLDYNGNVCGDQHE--GLHELELKYWLNPYQVYQSGLKDSEFKLANARSICLLDC 118
           L LT+ LDY GNVCGD+H   GL ELEL+YW NP QVYQSGLKDS+FKLA+ARSICL +C
Sbjct: 61  LRLTYGLDYKGNVCGDKHAHPGLSELELRYWQNPNQVYQSGLKDSQFKLADARSICLSEC 120

Query: 119 PNPPDDSLSWVCDYPEGDIRVSMNDWIDMNYDYYEFLTPEMKNSSLQLQGPCYPVIFPSI 178
           P P +DSL+WVCDYPEGDIR+SM DWI+ NYDY+EFLTPEM+NSSLQLQGPCYPVIFPS+
Sbjct: 121 PMPSEDSLNWVCDYPEGDIRLSMKDWINRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSV 180

Query: 179 NVYWSCQFIARASNSSLTHWQKLGGVNINE 208
           NVYWSCQFIARASN+SL HWQ++GGVNINE
Sbjct: 181 NVYWSCQFIARASNTSLKHWQQMGGVNINE 210


>Glyma06g38120.1 
          Length = 699

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 169/210 (80%), Positives = 192/210 (91%), Gaps = 2/210 (0%)

Query: 1   MRGPLGAVVGRYPSSDGTTHLGGIIRHSRKCRDILVLVIFIAFWISMIVNSSFAFNKGNP 60
           MRGPLGAV+GRYPSSDG T +GGIIRH+RKCRDI+VLVIFIAFWI+MIVNSSF FN+GNP
Sbjct: 1   MRGPLGAVIGRYPSSDGVTQMGGIIRHNRKCRDIIVLVIFIAFWIAMIVNSSFGFNQGNP 60

Query: 61  LMLTFVLDYNGNVCGDQHE--GLHELELKYWLNPYQVYQSGLKDSEFKLANARSICLLDC 118
           L LT+ LDY GNVCGD+H   GL ELEL+YW NP QVYQSGLKDS+FKLA+ARSICL +C
Sbjct: 61  LRLTYGLDYKGNVCGDKHAHPGLSELELRYWQNPNQVYQSGLKDSQFKLADARSICLSEC 120

Query: 119 PNPPDDSLSWVCDYPEGDIRVSMNDWIDMNYDYYEFLTPEMKNSSLQLQGPCYPVIFPSI 178
           P P +DSL+WVCDYPEGDIR+SM DWI+ NYDY+EFLTPEM+NSSLQLQGPCYPVIFP++
Sbjct: 121 PMPSEDSLNWVCDYPEGDIRLSMKDWINRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPTV 180

Query: 179 NVYWSCQFIARASNSSLTHWQKLGGVNINE 208
           NVYWSCQFIARASN+SL HWQ++GGVNINE
Sbjct: 181 NVYWSCQFIARASNTSLKHWQQMGGVNINE 210