Miyakogusa Predicted Gene

Lj0g3v0174579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0174579.1 Non Chatacterized Hit- tr|D8S2H6|D8S2H6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,40.43,1e-17,seg,NULL,CUFF.10970.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g39110.1                                                       153   6e-38
Glyma02g40780.1                                                       141   2e-34

>Glyma14g39110.1 
          Length = 370

 Score =  153 bits (386), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 93/175 (53%), Positives = 101/175 (57%), Gaps = 41/175 (23%)

Query: 1   MLGAVQLGLLAACVVLFVPMGMAGWHLSRNKVLFFSGALFITLAVGVHLTPYFPXXXXXX 60
           MLGAVQLGLLAACVVLFVPMGMAGWHLSRNKVLFFSGALFITLAVGVHLTPYFP      
Sbjct: 1   MLGAVQLGLLAACVVLFVPMGMAGWHLSRNKVLFFSGALFITLAVGVHLTPYFP---SVS 57

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLLHEIDWE----------------------------- 91
                                  LLHEI WE                             
Sbjct: 58  DFVTSVSSSSVNVVVDDRDSCVSLLHEIVWEVRPRRVFDFELNDNNNSVNYDKSWSWKRS 117

Query: 92  ---------RLKRHDVLELLNGSWVMVAGDSQARMFTLSLISLVLDSERVESVRA 137
                    RLKR+DV  LLNGSWV++AGDSQAR+F LSL+SLVL+ E +ESV+ 
Sbjct: 118 GSVDSCEFQRLKRYDVSVLLNGSWVVIAGDSQARIFALSLLSLVLEPEGMESVKG 172


>Glyma02g40780.1 
          Length = 374

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/176 (55%), Positives = 103/176 (58%), Gaps = 42/176 (23%)

Query: 1   MLGAVQLGLLAACVVLFVPMGMAGWHLSRNKVLFFSGALFITLAVGVHLTPYFPXXXXXX 60
           MLGAVQLGLLAACVVLFVPMGMAGWHLSRNKVLFFSGALFITLAVGVHLTPYFP      
Sbjct: 1   MLGAVQLGLLAACVVLFVPMGMAGWHLSRNKVLFFSGALFITLAVGVHLTPYFP---SVS 57

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXLLHEIDWE----------------------------- 91
                                  LLH+I WE                             
Sbjct: 58  DFVTSVSSSSVNVVVDDRDLCVSLLHDIVWEVRPRRVFDFELNNNNNNSVNYDKSWSWKR 117

Query: 92  ----------RLKRHDVLELLNGSWVMVAGDSQARMFTLSLISLVLDSERVESVRA 137
                     RLKRHDV  LLNGSWV+VAGDSQAR+FTLSL+SLVLDSE +ESV+ 
Sbjct: 118 SGSVESCEFQRLKRHDVSVLLNGSWVVVAGDSQARIFTLSLLSLVLDSEGMESVKG 173