Miyakogusa Predicted Gene

Lj0g3v0174479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0174479.1 Non Chatacterized Hit- tr|I1MLV2|I1MLV2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28533 PE,43.94,0.001,
,CUFF.10963.1
         (79 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g07750.5                                                        47   3e-06
Glyma16g07750.4                                                        47   3e-06
Glyma16g07750.1                                                        47   5e-06

>Glyma16g07750.5 
          Length = 662

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 2   QKRMRMMITTLKRINLDRTVTVENCINTSYDKDEWEKIPESHLLNNSETKDAGKTMYEEA 61
           Q  M  +IT  K IN +  VT EN   +SY+ +E EK+ +S+ + NSE KD  K + EEA
Sbjct: 371 QSSMENVIT--KHINSEGMVTTENSTKSSYNVEELEKVLDSNSIENSEMKDGRKILSEEA 428

Query: 62  INIKES 67
            N+KE+
Sbjct: 429 SNMKEA 434


>Glyma16g07750.4 
          Length = 652

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 2   QKRMRMMITTLKRINLDRTVTVENCINTSYDKDEWEKIPESHLLNNSETKDAGKTMYEEA 61
           Q  M  +IT  K IN +  VT EN   +SY+ +E EK+ +S+ + NSE KD  K + EEA
Sbjct: 371 QSSMENVIT--KHINSEGMVTTENSTKSSYNVEELEKVLDSNSIENSEMKDGRKILSEEA 428

Query: 62  INIKES 67
            N+KE+
Sbjct: 429 SNMKEA 434


>Glyma16g07750.1 
          Length = 4405

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 2/66 (3%)

Query: 2    QKRMRMMITTLKRINLDRTVTVENCINTSYDKDEWEKIPESHLLNNSETKDAGKTMYEEA 61
            Q  M  +IT  K IN +  VT EN   +SY+ +E EK+ +S+ + NSE KD  K + EEA
Sbjct: 4114 QSSMENVIT--KHINSEGMVTTENSTKSSYNVEELEKVLDSNSIENSEMKDGRKILSEEA 4171

Query: 62   INIKES 67
             N+KE+
Sbjct: 4172 SNMKEA 4177