Miyakogusa Predicted Gene

Lj0g3v0174279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0174279.1 tr|B9N5N6|B9N5N6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_582565 PE=4 SV=1,65.97,0,no
description,NULL; no description,BolA protein; BOLA-LIKE PROTEIN
CGI-143,NULL; BOLA-LIKE PROTEIN-,CUFF.10945.1
         (358 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g06810.1                                                       433   e-121
Glyma16g03370.1                                                       230   1e-60
Glyma16g34010.1                                                       126   4e-29
Glyma09g29520.1                                                       123   3e-28
Glyma05g02710.1                                                        88   1e-17
Glyma18g01700.1                                                        56   5e-08
Glyma05g32180.2                                                        49   9e-06

>Glyma07g06810.1 
          Length = 367

 Score =  433 bits (1113), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/373 (65%), Positives = 273/373 (73%), Gaps = 36/373 (9%)

Query: 1   MSTSSICSCSFRLVATRIPVSLYDKTPLFKTSTFLTKSIFSIKPITFQRIXXX----XXX 56
           M+T+SI S SFRLV TRIP+SL+ KTP   +  F TK  FS KPITFQR+          
Sbjct: 13  MATNSITSSSFRLVTTRIPLSLFRKTPPLLS--FPTKPFFS-KPITFQRLQPTPPPQSSS 69

Query: 57  XXXXXXXXXXXXLQPIEELPPKLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSK 116
                       LQPIE+LPPKLQEIV LFQSV EPKAKYEQLLFYGKNLKPL+ QFK+ 
Sbjct: 70  SSSSSSSSTSASLQPIEDLPPKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPQFKTN 129

Query: 117 ENKVEGCVSQVWVRAYLDQEKNVVYEADSDSVLTKGLAALLVQGLSGRPVQEVIRVTPDF 176
           +NKV+GCVSQVWVRAYLD  +NVVYEADSDS LTKGLAALLVQGLSGRPV E+IRVTPDF
Sbjct: 130 DNKVQGCVSQVWVRAYLDPNRNVVYEADSDSGLTKGLAALLVQGLSGRPVNEIIRVTPDF 189

Query: 177 AVLLGLQQSLTPSRNNGFLNMLRLMQKKALMLYVE-DEKGAELNSPGNSEVKDD------ 229
           A LLGLQQSLTPSRNNGFLNML+LMQ+KAL+   E  + G +       E + D      
Sbjct: 190 ATLLGLQQSLTPSRNNGFLNMLKLMQRKALLFGGESSDLGGDSEIASVPEFQGDENVELG 249

Query: 230 -----SFVENSSGGHSSEIDNSETXXXXXXXXXXXXXXDGGELGGRGRRIKEKMEKELNP 284
                  VENSSGG SSEI +                    EL GRG+RI+EK+EKEL P
Sbjct: 250 GRGKRGIVENSSGGESSEIVDENI-----------------ELWGRGKRIREKLEKELEP 292

Query: 285 VELQVEDVSYQHAGHAGVRGSDGETHFNLKVVSAEFEGKSLVKRHRLIYSLLQEELQSGL 344
           VEL+VEDVSYQHAGHAGVRGSDGETHFN++VVS EFEGKSLVKRHRLIY LLQEEL +GL
Sbjct: 293 VELEVEDVSYQHAGHAGVRGSDGETHFNVRVVSKEFEGKSLVKRHRLIYGLLQEELDAGL 352

Query: 345 HALSIVAKTPSEV 357
           HALSIVAKTP+EV
Sbjct: 353 HALSIVAKTPAEV 365


>Glyma16g03370.1 
          Length = 246

 Score =  230 bits (587), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/130 (83%), Positives = 119/130 (91%)

Query: 87  QSVQEPKAKYEQLLFYGKNLKPLDSQFKSKENKVEGCVSQVWVRAYLDQEKNVVYEADSD 146
           QSV EPKAKYEQL+FYGKNLKPL+ QFK+ +NKV+GCVSQVWVRAYLD  +NVVYEADSD
Sbjct: 29  QSVPEPKAKYEQLIFYGKNLKPLEPQFKTNDNKVQGCVSQVWVRAYLDPNRNVVYEADSD 88

Query: 147 SVLTKGLAALLVQGLSGRPVQEVIRVTPDFAVLLGLQQSLTPSRNNGFLNMLRLMQKKAL 206
           S LTKGLAALLVQGLSGRPV E+IRVTPDF  LLGLQQSLTPSRNNGFLNML+L+Q+KAL
Sbjct: 89  SGLTKGLAALLVQGLSGRPVNEIIRVTPDFVTLLGLQQSLTPSRNNGFLNMLKLIQRKAL 148

Query: 207 MLYVEDEKGA 216
           MLYVE EKG 
Sbjct: 149 MLYVEAEKGG 158


>Glyma16g34010.1 
          Length = 104

 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 72/90 (80%), Gaps = 1/90 (1%)

Query: 270 RGRRIKEKMEKELNPVELQVEDVSYQHAGHAGVRGS-DGETHFNLKVVSAEFEGKSLVKR 328
           R  RI+ K++  L    L+V+DVSYQHAGHA V+GS D ETHFNL +VS +FEG+SLVKR
Sbjct: 12  RASRIRSKLQTALEATVLEVDDVSYQHAGHAAVKGSSDKETHFNLNIVSPKFEGQSLVKR 71

Query: 329 HRLIYSLLQEELQSGLHALSIVAKTPSEVS 358
           HRLIY LL +ELQSGLHALSIVAKTP E +
Sbjct: 72  HRLIYDLLADELQSGLHALSIVAKTPHETN 101


>Glyma09g29520.1 
          Length = 104

 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/90 (66%), Positives = 72/90 (80%), Gaps = 1/90 (1%)

Query: 270 RGRRIKEKMEKELNPVELQVEDVSYQHAGHAGVRGS-DGETHFNLKVVSAEFEGKSLVKR 328
           R  RI+ K++  L    L+V+DVSYQHAGHA V+GS D ETHFN+K+VS +FEG+SLVKR
Sbjct: 12  RASRIRSKLQTALEATVLEVDDVSYQHAGHAAVKGSSDKETHFNVKIVSPKFEGQSLVKR 71

Query: 329 HRLIYSLLQEELQSGLHALSIVAKTPSEVS 358
           HRL+Y LL EELQSGLHALSIVAKT  E +
Sbjct: 72  HRLVYDLLAEELQSGLHALSIVAKTLHETN 101


>Glyma05g02710.1 
          Length = 703

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 2/141 (1%)

Query: 75  LPPKLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSKENKVEGCVSQVWVRAYLD 134
           +P KL+ + + F S++EP  + ++LL Y   + P+    +   N+V GC ++VWV   +D
Sbjct: 64  VPSKLEHLAEEFGSLREPVERVKRLLHYAAAMAPMPESNRVDANRVMGCTARVWVEVGID 123

Query: 135 QEKNVVYEADSDSVLTKGLAALLVQGLSGRPVQEVIRVTPD--FAVLLGLQQSLTPSRNN 192
           +E  V   ADSDS +T+G  A LV  L G    EV++VT D   A+ +GL      SR N
Sbjct: 124 EEGKVRVAADSDSEITRGFCACLVWVLDGSEPDEVMKVTTDDLTALNVGLPGGSGRSRVN 183

Query: 193 GFLNMLRLMQKKALMLYVEDE 213
            + N+L  MQK+   L  + E
Sbjct: 184 TWHNVLVSMQKRTKQLLAQRE 204


>Glyma18g01700.1 
          Length = 187

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%)

Query: 74  ELPPKLQEIVKLFQSVQEPKAKYEQLLFYGKNLKPLDSQFKSKENKVEGCVSQVWVRAYL 133
           +L  KL  +   F S+ +P  + ++LL Y   L       +   N+V GC SQVWV A +
Sbjct: 44  KLAHKLTSLTSEFTSLTQPIDRVKRLLHYASLLPHFADNERIPANRVGGCASQVWVVAEV 103

Query: 134 DQEKNVVYEADSDSVLTKGLA 154
           D+ + + + ADSDS ++KG  
Sbjct: 104 DERRRMRFRADSDSEISKGFC 124


>Glyma05g32180.2 
          Length = 93

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 56/91 (61%), Gaps = 13/91 (14%)

Query: 267 LGGRGRRIKEKMEKELNPVELQVEDVSYQHAGHAGVRGSDGETHFNLKVVSAEFEGKSLV 326
           +G    +++  ++ +LNP  L+V D+S          G  G + F +++VS +FEGK L+
Sbjct: 1   MGVTKEQVELSLKAKLNPSHLEVVDIS----------GGCGAS-FVVEIVSEQFEGKRLL 49

Query: 327 KRHRLIYSLLQEELQSGLHALSI-VAKTPSE 356
           +RHR++ + L+EE++  +HALSI  A TP +
Sbjct: 50  ERHRMVNAALEEEMKQ-IHALSIKKAVTPEQ 79