Miyakogusa Predicted Gene

Lj0g3v0173589.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0173589.1 CUFF.10895.1
         (119 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g09190.1                                                       117   2e-27

>Glyma02g09190.1 
          Length = 367

 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 81/119 (68%), Gaps = 19/119 (15%)

Query: 1   MVLTELAALYYSAVSDTDNSNNRWMKFSSNLPSKPRSPVLVGDSAFALCEVGSR-----R 55
           MVLTELAALY         +   W+KFSSNLPSKPRS +L+ DSAFALC+VGS      +
Sbjct: 157 MVLTELAALY------CHRNTTTWLKFSSNLPSKPRSSLLINDSAFALCDVGSPWRNRWK 210

Query: 56  VAPALAKKS-------WSRLERNEWGDVFDILKRPRLVRGA-GDRVLMVGGLKSSFSLN 106
           +     K +       WS L+R+EWGDVFD+L RPRLVRG  G+ +LMVGGLKSSF+LN
Sbjct: 211 LFSCTIKSTTTSVVPVWSPLDRHEWGDVFDVLNRPRLVRGGHGNFILMVGGLKSSFALN 269