Miyakogusa Predicted Gene

Lj0g3v0173489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0173489.1 Non Chatacterized Hit- tr|K4BCC9|K4BCC9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,60.94,5e-17,UPF0121,Uncharacterised protein family UPF0121;
seg,NULL; RNA POLYMERASE SIGMA FACTOR
RPO,NULL,NODE_43711_length_1065_cov_254.821594.path1.1
         (346 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g07400.2                                                       494   e-140
Glyma13g07400.1                                                       494   e-140
Glyma19g05460.1                                                       488   e-138
Glyma19g05460.2                                                       479   e-135
Glyma19g05460.3                                                       373   e-103
Glyma19g05820.1                                                       106   4e-23
Glyma14g33200.1                                                        57   3e-08

>Glyma13g07400.2 
          Length = 366

 Score =  494 bits (1272), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 241/347 (69%), Positives = 265/347 (76%), Gaps = 1/347 (0%)

Query: 1   MGEEREDPQKLKKLXXXXXXXXXXXRWPDYWANVLIPPNMASRSDVVSHYKRKFYQRHVD 60
           MGEEREDPQKLK+L           RWPDYW NVLIPP+MASR DVVSH+KRKFYQR+VD
Sbjct: 20  MGEEREDPQKLKRLAADSYDYDNDSRWPDYWNNVLIPPHMASRDDVVSHFKRKFYQRYVD 79

Query: 61  PDLVVEPMNFGXXXXXXXXXXXXXXXXXXXXND-QVXXXXXXXXXXXXXXXXXXXPNSTP 119
           PD VVEPM+ G                    N  +                    P+ TP
Sbjct: 80  PDFVVEPMSVGGSSSQPVRSSTTSSSSPLTNNQPRARSSGSTNRTSGTSTTAGPGPSPTP 139

Query: 120 LRWDRQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYRLSFMGTTCSSLYSLYSQYGKPR 179
           LRWDRQT+LFSVNAW              +HLS RAYRL F+GT CSSLYSLYSQYGKPR
Sbjct: 140 LRWDRQTVLFSVNAWVFVVAFLAAIPLVPKHLSHRAYRLCFLGTLCSSLYSLYSQYGKPR 199

Query: 180 AWNLQALQVYFQSIIAAKDFIYFIYCLTFVTSHLCLKFALIPIICWAFENVAKFLRRNFS 239
           AWN QALQVYFQSIIA+KDF+YFIYCLTFVTSHLCLKFALIPI+CW+FE+VAKFLRRNFS
Sbjct: 200 AWNWQALQVYFQSIIASKDFLYFIYCLTFVTSHLCLKFALIPILCWSFEHVAKFLRRNFS 259

Query: 240 RSTLYRKYLEEPCVWVESNNMTLNILTSHAEIGLGFLLVISLFSWQRNIIQTFMYWQLLK 299
           RSTLYRKYLEEPCVWVESN+ TLNI+TSHAEIGLGFLL+ISLFSWQRNIIQ FMYWQLLK
Sbjct: 260 RSTLYRKYLEEPCVWVESNSSTLNIVTSHAEIGLGFLLIISLFSWQRNIIQAFMYWQLLK 319

Query: 300 LMYNVPVTAAYHQSVWAKIGRTVNPLIHSHAPFLKTPLSAVQRWWLR 346
           LMY++PVTA YHQSVWA+IGR+VNPLI  HAPFLKTP+S +QRWWLR
Sbjct: 320 LMYHIPVTAPYHQSVWAQIGRSVNPLIQRHAPFLKTPISTIQRWWLR 366


>Glyma13g07400.1 
          Length = 396

 Score =  494 bits (1271), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 241/347 (69%), Positives = 265/347 (76%), Gaps = 1/347 (0%)

Query: 1   MGEEREDPQKLKKLXXXXXXXXXXXRWPDYWANVLIPPNMASRSDVVSHYKRKFYQRHVD 60
           MGEEREDPQKLK+L           RWPDYW NVLIPP+MASR DVVSH+KRKFYQR+VD
Sbjct: 20  MGEEREDPQKLKRLAADSYDYDNDSRWPDYWNNVLIPPHMASRDDVVSHFKRKFYQRYVD 79

Query: 61  PDLVVEPMNFGXXXXXXXXXXXXXXXXXXXXND-QVXXXXXXXXXXXXXXXXXXXPNSTP 119
           PD VVEPM+ G                    N  +                    P+ TP
Sbjct: 80  PDFVVEPMSVGGSSSQPVRSSTTSSSSPLTNNQPRARSSGSTNRTSGTSTTAGPGPSPTP 139

Query: 120 LRWDRQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYRLSFMGTTCSSLYSLYSQYGKPR 179
           LRWDRQT+LFSVNAW              +HLS RAYRL F+GT CSSLYSLYSQYGKPR
Sbjct: 140 LRWDRQTVLFSVNAWVFVVAFLAAIPLVPKHLSHRAYRLCFLGTLCSSLYSLYSQYGKPR 199

Query: 180 AWNLQALQVYFQSIIAAKDFIYFIYCLTFVTSHLCLKFALIPIICWAFENVAKFLRRNFS 239
           AWN QALQVYFQSIIA+KDF+YFIYCLTFVTSHLCLKFALIPI+CW+FE+VAKFLRRNFS
Sbjct: 200 AWNWQALQVYFQSIIASKDFLYFIYCLTFVTSHLCLKFALIPILCWSFEHVAKFLRRNFS 259

Query: 240 RSTLYRKYLEEPCVWVESNNMTLNILTSHAEIGLGFLLVISLFSWQRNIIQTFMYWQLLK 299
           RSTLYRKYLEEPCVWVESN+ TLNI+TSHAEIGLGFLL+ISLFSWQRNIIQ FMYWQLLK
Sbjct: 260 RSTLYRKYLEEPCVWVESNSSTLNIVTSHAEIGLGFLLIISLFSWQRNIIQAFMYWQLLK 319

Query: 300 LMYNVPVTAAYHQSVWAKIGRTVNPLIHSHAPFLKTPLSAVQRWWLR 346
           LMY++PVTA YHQSVWA+IGR+VNPLI  HAPFLKTP+S +QRWWLR
Sbjct: 320 LMYHIPVTAPYHQSVWAQIGRSVNPLIQRHAPFLKTPISTIQRWWLR 366


>Glyma19g05460.1 
          Length = 345

 Score =  488 bits (1257), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/343 (70%), Positives = 262/343 (76%), Gaps = 2/343 (0%)

Query: 6   EDPQKLKKLXXXXXXXXXXXRWPDYWANVLIPPNMASRSDVVSHYKRKFYQRHVDPDLVV 65
           EDPQKLK+L           RWP YW NVLIPP+MASR DVVSH+KRKFYQR+VDPDLVV
Sbjct: 3   EDPQKLKRLAADSYDYDNDSRWPGYWNNVLIPPHMASRDDVVSHFKRKFYQRYVDPDLVV 62

Query: 66  EPMNFGXXXXXXXXXXXXXXXXXXXXNDQ--VXXXXXXXXXXXXXXXXXXXPNSTPLRWD 123
           EPM+ G                    N+Q                      P+ TPLRWD
Sbjct: 63  EPMSVGGSSSQPTRSSTTSSSSSPPTNNQPRARSSGSTNRTSGTSTTAGPGPSPTPLRWD 122

Query: 124 RQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYRLSFMGTTCSSLYSLYSQYGKPRAWNL 183
           RQT+LFSV AW              +HLS RAYRL F+GT CSSLYSLYSQYGKPRAWNL
Sbjct: 123 RQTVLFSVYAWVFVVAFLAAIPLVPKHLSHRAYRLCFLGTLCSSLYSLYSQYGKPRAWNL 182

Query: 184 QALQVYFQSIIAAKDFIYFIYCLTFVTSHLCLKFALIPIICWAFENVAKFLRRNFSRSTL 243
           QALQVYFQSI+A+KDFIYFIYCLTFVTSHLCLKFALIPI+CW+FE+VAKFLRRNFSRSTL
Sbjct: 183 QALQVYFQSIVASKDFIYFIYCLTFVTSHLCLKFALIPILCWSFEHVAKFLRRNFSRSTL 242

Query: 244 YRKYLEEPCVWVESNNMTLNILTSHAEIGLGFLLVISLFSWQRNIIQTFMYWQLLKLMYN 303
           YRKYLEEPCVWVESNN TLNILTSHAEIGLGFLL+ISLFSWQRNIIQTFMYWQLLKLMY+
Sbjct: 243 YRKYLEEPCVWVESNNSTLNILTSHAEIGLGFLLIISLFSWQRNIIQTFMYWQLLKLMYH 302

Query: 304 VPVTAAYHQSVWAKIGRTVNPLIHSHAPFLKTPLSAVQRWWLR 346
           VPVTA YHQSVWA+IGRTVNPLI  HAPFLKTP+S +QRWWLR
Sbjct: 303 VPVTAPYHQSVWAQIGRTVNPLIQRHAPFLKTPISTIQRWWLR 345


>Glyma19g05460.2 
          Length = 343

 Score =  479 bits (1233), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/343 (69%), Positives = 260/343 (75%), Gaps = 4/343 (1%)

Query: 6   EDPQKLKKLXXXXXXXXXXXRWPDYWANVLIPPNMASRSDVVSHYKRKFYQRHVDPDLVV 65
           EDPQKLK+L           RWP YW NVLIPP+MASR DVVSH+KRKFYQR+VDPDLVV
Sbjct: 3   EDPQKLKRLAADSYDYDNDSRWPGYWNNVLIPPHMASRDDVVSHFKRKFYQRYVDPDLVV 62

Query: 66  EPMNFGXXXXXXXXXXXXXXXXXXXXNDQ--VXXXXXXXXXXXXXXXXXXXPNSTPLRWD 123
           EPM+ G                    N+Q                      P+ TPLRWD
Sbjct: 63  EPMSVGGSSSQPTRSSTTSSSSSPPTNNQPRARSSGSTNRTSGTSTTAGPGPSPTPLRWD 122

Query: 124 RQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYRLSFMGTTCSSLYSLYSQYGKPRAWNL 183
           RQT+LFSV AW              +HLS RAYRL F+GT CSSLYSLYSQYGKPRAWNL
Sbjct: 123 RQTVLFSVYAWVFVVAFLAAIPLVPKHLSHRAYRLCFLGTLCSSLYSLYSQYGKPRAWNL 182

Query: 184 QALQVYFQSIIAAKDFIYFIYCLTFVTSHLCLKFALIPIICWAFENVAKFLRRNFSRSTL 243
           QALQVYFQSI+A+KDFIYFIYCLTFVTSHLCLKFALIPI+CW+FE+VAKFLRRNFSRSTL
Sbjct: 183 QALQVYFQSIVASKDFIYFIYCLTFVTSHLCLKFALIPILCWSFEHVAKFLRRNFSRSTL 242

Query: 244 YRKYLEEPCVWVESNNMTLNILTSHAEIGLGFLLVISLFSWQRNIIQTFMYWQLLKLMYN 303
           YRKYLEEPCVWVESNN TLNILTSHAEIGLGFLL+ISL  WQRNIIQTFMYWQLLKLMY+
Sbjct: 243 YRKYLEEPCVWVESNNSTLNILTSHAEIGLGFLLIISL--WQRNIIQTFMYWQLLKLMYH 300

Query: 304 VPVTAAYHQSVWAKIGRTVNPLIHSHAPFLKTPLSAVQRWWLR 346
           VPVTA YHQSVWA+IGRTVNPLI  HAPFLKTP+S +QRWWLR
Sbjct: 301 VPVTAPYHQSVWAQIGRTVNPLIQRHAPFLKTPISTIQRWWLR 343


>Glyma19g05460.3 
          Length = 282

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/280 (66%), Positives = 203/280 (72%), Gaps = 2/280 (0%)

Query: 6   EDPQKLKKLXXXXXXXXXXXRWPDYWANVLIPPNMASRSDVVSHYKRKFYQRHVDPDLVV 65
           EDPQKLK+L           RWP YW NVLIPP+MASR DVVSH+KRKFYQR+VDPDLVV
Sbjct: 3   EDPQKLKRLAADSYDYDNDSRWPGYWNNVLIPPHMASRDDVVSHFKRKFYQRYVDPDLVV 62

Query: 66  EPMNFGXXXXXXXXXXXXXXXXXXXXNDQ--VXXXXXXXXXXXXXXXXXXXPNSTPLRWD 123
           EPM+ G                    N+Q                      P+ TPLRWD
Sbjct: 63  EPMSVGGSSSQPTRSSTTSSSSSPPTNNQPRARSSGSTNRTSGTSTTAGPGPSPTPLRWD 122

Query: 124 RQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYRLSFMGTTCSSLYSLYSQYGKPRAWNL 183
           RQT+LFSV AW              +HLS RAYRL F+GT CSSLYSLYSQYGKPRAWNL
Sbjct: 123 RQTVLFSVYAWVFVVAFLAAIPLVPKHLSHRAYRLCFLGTLCSSLYSLYSQYGKPRAWNL 182

Query: 184 QALQVYFQSIIAAKDFIYFIYCLTFVTSHLCLKFALIPIICWAFENVAKFLRRNFSRSTL 243
           QALQVYFQSI+A+KDFIYFIYCLTFVTSHLCLKFALIPI+CW+FE+VAKFLRRNFSRSTL
Sbjct: 183 QALQVYFQSIVASKDFIYFIYCLTFVTSHLCLKFALIPILCWSFEHVAKFLRRNFSRSTL 242

Query: 244 YRKYLEEPCVWVESNNMTLNILTSHAEIGLGFLLVISLFS 283
           YRKYLEEPCVWVESNN TLNILTSHAEIGLGFLL+ISLFS
Sbjct: 243 YRKYLEEPCVWVESNNSTLNILTSHAEIGLGFLLIISLFS 282


>Glyma19g05820.1 
          Length = 318

 Score =  106 bits (264), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 116/270 (42%), Gaps = 48/270 (17%)

Query: 120 LRWDRQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYRLSFMGTTCSSLYSLYSQYGKPR 179
           + WDRQT+LF V AW              +HLS R YRL F+GT CSS     S      
Sbjct: 51  VHWDRQTVLFFVYAWVFVVAFLAVIPLVPKHLSHRTYRLCFLGTLCSSCTHSKSLEFAGL 110

Query: 180 AWNLQALQVYFQSIIAAKDFIYFIYCLT----------FVTSHLCLKFALIPIICWAFEN 229
           A +L ++   F+         Y  Y L             TSHLCLKFALIPI+CW+FE+
Sbjct: 111 A-SLLSVNNCFKGFYILHLLSYICYTLLQKRLSTQRWPRCTSHLCLKFALIPILCWSFEH 169

Query: 230 VAKFLRRNF-----SRSTLYRKYLEEPCVWVESNNMTLNILTSHAEIGLGFL--LVISLF 282
           VAKF R        + ST           W+ ++++ L ++  H           V    
Sbjct: 170 VAKFHRLILVALPCTGSTWKSLVFGWNWTWIPTDHLIL-LIKWHGRFFANRYRRFVKGGP 228

Query: 283 SWQRNIIQTFMYWQL----------LKLMYNVPVTAAYH-------------------QS 313
            W R+  Q  +Y +               Y +P+ A  H                   QS
Sbjct: 229 LWWRHRTQWCVYMEEFWPSAIDNTGFYATYPIPMVAMEHNSNIHLFFWCHVPVTAPYRQS 288

Query: 314 VWAKIGRTVNPLIHSHAPFLKTPLSAVQRW 343
           VW +IGR VNPLI  HAPFL+TP S +QRW
Sbjct: 289 VWVQIGRMVNPLIQRHAPFLETPKSTIQRW 318


>Glyma14g33200.1 
          Length = 49

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 28/35 (80%)

Query: 149 RHLSQRAYRLSFMGTTCSSLYSLYSQYGKPRAWNL 183
           +HLS  AY L F+ T CSSLYSLYSQY KPRAWNL
Sbjct: 15  KHLSHSAYCLCFLCTLCSSLYSLYSQYRKPRAWNL 49