Miyakogusa Predicted Gene

Lj0g3v0172629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0172629.1 tr|G7JZQ5|G7JZQ5_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_5g073340 PE=4 SV=1,31.9,9e-19,no
description,NULL; RNI-like,NULL,gene.g13277.t1.1
         (260 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46320.1                                                        75   5e-14
Glyma18g35330.1                                                        75   7e-14
Glyma18g35320.1                                                        66   3e-11
Glyma13g43040.1                                                        64   1e-10
Glyma08g46590.1                                                        63   3e-10
Glyma08g46590.2                                                        63   4e-10
Glyma18g35360.1                                                        59   4e-09
Glyma08g46580.1                                                        52   6e-07

>Glyma08g46320.1 
          Length = 379

 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 97/214 (45%), Gaps = 18/214 (8%)

Query: 9   HPIKNLVLYLNSTGSDEAF---TFHEWVEVAKRHPIESLDIYTAGCATVSPSIFSSRTLV 65
            P+K   L  NS G D  F    F  WV    +  +E L I       +   I + +TLV
Sbjct: 79  QPLKLARLRFNSCGYDNNFPYSHFKIWVNAVIQRGLEHLQIEMPRPFELPNIILNCKTLV 138

Query: 66  VLKLTSIGMVGNVLSVDLPSLKTLHLSQVMFQKRDDFKKLLYGAPILQDLYLAFVNSEIP 125
           VLKL     V  +  V LP+LKTLHL      +     K+L+  PIL+DL     N+   
Sbjct: 139 VLKLYRFR-VNALGLVHLPALKTLHLDNFTMLETWHLAKVLHECPILEDLR---ANNMFF 194

Query: 126 YTTGS----KILPKLVKLHLDTWADPLSALELAQRECDNINMYIPPPVFPNLFLVEKPVF 181
           Y        +I+PKLVK  +         L++A    + +  +I P      F    PVF
Sbjct: 195 YNKSDVVEFQIMPKLVKAEIKVNFRFEIPLKVAS-NVEYLRFFIKPDT--ECF----PVF 247

Query: 182 PNLIHIEIYCQRFDGWNRVLQMLRQCPRLQHLVI 215
            NLIH+E+       WN V +M++ CP+LQ  V+
Sbjct: 248 HNLIHLEVSFWFVVRWNLVFEMIKHCPKLQTFVL 281


>Glyma18g35330.1 
          Length = 342

 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 94/172 (54%), Gaps = 11/172 (6%)

Query: 58  IFSSRTLVVLKLTSIGMVGNVLSVDLPSLKTLHLSQVMFQKRDDFKKLLYGAPILQDLYL 117
           I +S TLV LKL  + +   V SVDLPSLKTLHL +V F +     ++L   P+L+DL +
Sbjct: 101 ILTSTTLVDLKLKGLTLNSRVSSVDLPSLKTLHLRKVHFVEPRLLLQILSACPLLEDLLI 160

Query: 118 AFVNSEIPYTTGSKI--LPKLVKLHLDTWADPLSALELAQRECDNINMYIPPPVFPNLFL 175
             ++    +++   +  +PKLVK  +       +++++      N+  ++   V  + F 
Sbjct: 161 RSLHVTNNFSSDEHLERMPKLVKADISN-----ASIDVQMATFYNVE-FLRTQVGSDFFS 214

Query: 176 VEKPVFPNLIHIE-IYCQRFDGWNRVLQMLRQCPRLQHLVIRKAN--VKTVS 224
             K  F NL H+E I+  RF+   R++ +L +CP LQ LV+ + N  VKT S
Sbjct: 215 DNKHTFLNLTHMELIFRFRFNVLGRLINLLHECPNLQILVVDEGNLFVKTSS 266


>Glyma18g35320.1 
          Length = 345

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 91/193 (47%), Gaps = 38/193 (19%)

Query: 32  WVEVAKRHPIESLDIYTAGCATVSPS--IFSSRTLVVLKLTSIGM-VGNVLSVDLPSLKT 88
           W+  A +H +E LD+ + GCA   PS  +FS +TLVVLKL ++ +   N   V LP LK 
Sbjct: 99  WISAATQHRVEHLDL-SLGCAVELPSFLLFSCKTLVVLKLLNVVLSFNNSCCVYLPRLKI 157

Query: 89  LHLSQVMFQKRDDFKKLLYGAPILQDLYLAFVNSEIPYTTGSKILPKLVKLHLDTWADPL 148
           LHLS V F K  D  +LL G+P L+DL   F                           PL
Sbjct: 158 LHLSSVAFSKDRDLAQLLSGSPNLEDLEAKF---------------------------PL 190

Query: 149 SALELAQRECDNINMYIPPPVFP--NLFLVEKPVFPNLIHIEIYCQRFDGWNRVLQMLRQ 206
             ++  Q    N  + I    F   N F  E   F NL H+E +  R  G   VL ++++
Sbjct: 191 EVVDNVQFLRINWVLIISVRFFKDHNGFTSE---FQNLTHLEFFSYR--GGFFVLDLIKR 245

Query: 207 CPRLQHLVIRKAN 219
           CP+LQ L I K +
Sbjct: 246 CPKLQILTIYKVD 258


>Glyma13g43040.1 
          Length = 248

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 12/153 (7%)

Query: 66  VLKLTSIGMVGNVLSVDLPSLKTLHLSQVMF-QKRDDFKKLLYGAPILQDLYLAFVNSEI 124
           V +L S+ +     S DLP LK LHL  V F Q  + F +LL G P L+D+ L ++ S  
Sbjct: 65  VFQLDSLSLKA-FSSADLPLLKILHLPHVFFSQNINFFGELLSGCPNLEDMELKYLGSTS 123

Query: 125 PYTTGS-KILPKLVKLHLDTWADPLSALELAQRECDNINMYIPPPVFPNLFLVEKPVFPN 183
                  K LPKLV+  ++    PL  +   Q    N  + I   + P         F N
Sbjct: 124 NAIEAKFKKLPKLVRAVMNKDQIPLEVVHNVQFLRINWRVKINEDLIPE--------FHN 175

Query: 184 LIHIEI-YCQRFDGWNRVLQMLRQCPRLQHLVI 215
           L  IE  Y +    W  VL++L+ CP LQHLVI
Sbjct: 176 LTRIEFSYSEHNRNWMEVLKVLKHCPNLQHLVI 208


>Glyma08g46590.1 
          Length = 515

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 32/210 (15%)

Query: 32  WVEVAKRHPIESLDIYTAGCATVSP--------SIFSSRTLVVLKLTSIGMVGNVL---- 79
           WV  A +  +E+L      C +++P        ++FS +TLVVLKL   G+  N      
Sbjct: 279 WVSAALQRRVENL------CLSLTPLTKMVLPSALFSCKTLVVLKLIG-GLNRNPFPLDF 331

Query: 80  -SVDLPSLKTLHLSQVMFQKRDDFKKLLYGAPILQDLYLAFVNSEIPYTTGSKILPKLVK 138
            SVDLP L TLHL   + ++R D  +LL G+P L+ L++  +    P     + LPKL++
Sbjct: 332 KSVDLPLLTTLHLQSFILERR-DMAELLRGSPNLEYLFVGHMYFSGPEARFER-LPKLLR 389

Query: 139 LHLDTWADPLSALELAQ-RECDNINMYIPPPVFPNLFLVEKPVFPNLIHIEI-YCQRFDG 196
             +     PL  +   Q    D    ++      NL     P F NL H+E+ Y +    
Sbjct: 390 ATIAFGHVPLEVVNNVQFLRID----WMEHKEEANLI----PEFQNLTHLELGYSECTRD 441

Query: 197 WNRVLQMLRQCPRLQHLVIRKANVKTVSMN 226
           W  VL+++++CP LQ L I   ++   + +
Sbjct: 442 WVDVLEVIQRCPNLQILDIDMGSIDMTTRD 471


>Glyma08g46590.2 
          Length = 380

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 38/217 (17%)

Query: 32  WVEVAKRHPIESLDIYTAGCATVSP--------SIFSSRTLVVLKLTSIGMVGNVL---- 79
           WV  A +  +E+L      C +++P        ++FS +TLVVLKL   G+  N      
Sbjct: 101 WVSAALQRRVENL------CLSLTPLTKMVLPSALFSCKTLVVLKLIG-GLNRNPFPLDF 153

Query: 80  -SVDLPSLKTLHLSQVMFQKRDDFKKLLYGAPILQDLYLAFVNSEIPYTTGSKILPKLVK 138
            SVDLP L TLHL   + ++R D  +LL G+P L+ L++  +    P     + LPKL++
Sbjct: 154 KSVDLPLLTTLHLQSFILERR-DMAELLRGSPNLEYLFVGHMYFSGPEARFER-LPKLLR 211

Query: 139 LHLDTWADPLSALELAQRECDNINM----YIPPPVFPNLFLVEKPVFPNLIHIEI-YCQR 193
             +     PL  +       +N+      ++      NL     P F NL H+E+ Y + 
Sbjct: 212 ATIAFGHVPLEVV-------NNVQFLRIDWMEHKEEANLI----PEFQNLTHLELGYSEC 260

Query: 194 FDGWNRVLQMLRQCPRLQHLVIRKANVKTVSMNAAAG 230
              W  VL+++++CP LQ L I   ++   + +    
Sbjct: 261 TRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRDDEGA 297


>Glyma18g35360.1 
          Length = 357

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 27/182 (14%)

Query: 39  HPIESLDIYTAGCATVSPSIFSSRTLVVLKLTSIGMVGNVLSVDLPSLKTLHLSQVMFQK 98
            PI+   +  + C   + SI  SR LVVL+L+   + G + S D PSLKTLHL  V  ++
Sbjct: 82  QPIKRFILACSFCDVYTLSI--SRYLVVLELSGPTLRG-ISSCDFPSLKTLHLKMVHLRE 138

Query: 99  RDDFKKLLYGAPILQDLYLAFVNSEIPYTTGSKI-LPKLVKLHLDTWADPLSALELAQRE 157
                ++L   P+L+DL+++ +     Y  G+ I LP L            S ++  + +
Sbjct: 139 CRCLVEILAACPVLEDLFISSLRVTSSYCHGACIQLPTL------------SNVKFLRTD 186

Query: 158 CDNINMYIPPPVFPNLFLVEKPVFPNLIHIEIYCQRFDGWNRVLQMLRQCPRLQHLVIRK 217
              +        F  LF      F NL ++E+       W+ +L++L  CP LQ LVI K
Sbjct: 187 VVQLR-----TTFVGLF-----TFVNLTYLELIVDA-HYWDWLLKLLHCCPNLQILVIDK 235

Query: 218 AN 219
            N
Sbjct: 236 GN 237


>Glyma08g46580.1 
          Length = 192

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 6/110 (5%)

Query: 9   HPIKNLVLYLNSTGSDEAFTFHEWVEVAKRHPIESLDIYTAGCATVSPSIFSSRTLVVLK 68
            PI+   L   S+  D +   + WV    +  ++ L++       +   I +S TLVVLK
Sbjct: 74  QPIQRFYLACMSSLCDTSMV-NTWVTTVIQRKVQRLELSLPSTINLPCCILTSTTLVVLK 132

Query: 69  LTSIGMVGNVLS---VDLPSLKTLHLSQVMFQKRDDFKKLLYGAPILQDL 115
           L+  G+  N +S   VDLPSLK LHL +V F +     ++L   P+L+DL
Sbjct: 133 LS--GLTVNRVSSSPVDLPSLKALHLRRVHFLELRWLLQILSACPLLEDL 180