Miyakogusa Predicted Gene

Lj0g3v0172469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0172469.1 Non Chatacterized Hit- tr|D7M0D1|D7M0D1_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.99,9e-18,coiled-coil,NULL; seg,NULL; TARGETING PROTEIN FOR
XKLP2,NULL; TPX2_importin,Cell cycle regulated mic,CUFF.10841.1
         (341 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g13280.1                                                       511   e-145
Glyma06g44460.1                                                       502   e-142
Glyma18g26640.1                                                       322   4e-88
Glyma11g03060.1                                                       104   1e-22
Glyma17g14600.2                                                       102   7e-22
Glyma07g12720.1                                                       100   2e-21
Glyma17g14600.1                                                        89   5e-18
Glyma05g04130.1                                                        87   2e-17
Glyma01g42300.1                                                        66   6e-11

>Glyma12g13280.1 
          Length = 749

 Score =  511 bits (1317), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 262/341 (76%), Positives = 283/341 (82%)

Query: 1   MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
           MMAK+PKFKARPLNKKILQT TLPP+PRSTP  PEFKEFHLETLARAHQ+AD+ASIASTE
Sbjct: 340 MMAKIPKFKARPLNKKILQTATLPPVPRSTPQLPEFKEFHLETLARAHQNADTASIASTE 399

Query: 61  VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
           VSHKE+SWKP+LTEPKTP+LQTSLRARPPK+KSS ELEQEELEK PKFKARPLNKKIFES
Sbjct: 400 VSHKESSWKPYLTEPKTPLLQTSLRARPPKVKSSLELEQEELEKAPKFKARPLNKKIFES 459

Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEGAHNHNPIPRKTTP 180
           KGDIG+FCHTKKHVTEPQEFHFAT+ERIPPPAA+ADLF KL +KSE A NHNPIPR TTP
Sbjct: 460 KGDIGVFCHTKKHVTEPQEFHFATDERIPPPAAMADLFGKLSMKSEPARNHNPIPRNTTP 519

Query: 181 NPFHLHTEERGAXXXXXXXXXXXXXXXXXXAARVPKANPYPYTTDFAVIPPKPEPKHCTK 240
           NPFHLHTEERGA                   AR+PKANPYPYTTD+ VIPPKPEPK CT+
Sbjct: 520 NPFHLHTEERGAEKEKKLVMDLMQKQWEEENARIPKANPYPYTTDYPVIPPKPEPKQCTR 579

Query: 241 PEPFQLESLVRHXXXXXXXXXXXXXXXXXXXXXXXFKAQPVLKEDPIPVPEKVRKPLTQV 300
           PEPFQLESLVRH                       FKAQP+LKEDPIP+PEKVRKPLTQV
Sbjct: 580 PEPFQLESLVRHEEEIQKEHEERHRTEREEAQMRAFKAQPILKEDPIPLPEKVRKPLTQV 639

Query: 301 QEFSLRLTNRAVDRAQFDEKIKEKETMYKRYREESEAERMV 341
           QEFSL + +RAVDRAQFDE+IKEKE MYKRYREESEA RM+
Sbjct: 640 QEFSLHVNHRAVDRAQFDERIKEKEMMYKRYREESEAARMI 680



 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 38/49 (77%)

Query: 72  LTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
           LT PK P  +TS R RP ++KSS ELE+E + KIPKFKARPLNKKI ++
Sbjct: 311 LTRPKEPEFETSQRIRPARVKSSAELEEEMMAKIPKFKARPLNKKILQT 359


>Glyma06g44460.1 
          Length = 745

 Score =  502 bits (1292), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 259/341 (75%), Positives = 282/341 (82%)

Query: 1   MMAKMPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTE 60
           MMAK+PKFKARP+NKKILQT TLPP+PRSTP  PEFKEFHLETLARAHQ+AD+ASIASTE
Sbjct: 336 MMAKIPKFKARPVNKKILQTATLPPVPRSTPQLPEFKEFHLETLARAHQNADTASIASTE 395

Query: 61  VSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
           VSHK++SWK H+TEPKTP+LQTSLRARPPK+KSS ELEQEELEKIPKFKARPLNKKIFES
Sbjct: 396 VSHKQSSWKHHITEPKTPLLQTSLRARPPKVKSSLELEQEELEKIPKFKARPLNKKIFES 455

Query: 121 KGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEGAHNHNPIPRKTTP 180
           KGDIG+F HTKKHVTEPQEFHFAT+ERIPPPAA+ADLF KL LKSE + NHNPIPR TTP
Sbjct: 456 KGDIGVFYHTKKHVTEPQEFHFATDERIPPPAAMADLFGKLSLKSEPSRNHNPIPRNTTP 515

Query: 181 NPFHLHTEERGAXXXXXXXXXXXXXXXXXXAARVPKANPYPYTTDFAVIPPKPEPKHCTK 240
           NPFHLHTEERGA                   AR+PKANPYPYTTD+ VIPPKPEPK CT+
Sbjct: 516 NPFHLHTEERGAEKEKKLVVDLLQKQWEEENARIPKANPYPYTTDYPVIPPKPEPKQCTR 575

Query: 241 PEPFQLESLVRHXXXXXXXXXXXXXXXXXXXXXXXFKAQPVLKEDPIPVPEKVRKPLTQV 300
           PEPFQLESLVRH                       FKAQP++KEDPIPVPEKVRKPLTQV
Sbjct: 576 PEPFQLESLVRHEEEMQKEHEERRRMEKEEAQMRAFKAQPIIKEDPIPVPEKVRKPLTQV 635

Query: 301 QEFSLRLTNRAVDRAQFDEKIKEKETMYKRYREESEAERMV 341
           QEFSL + +RAVDRAQFDE+IKEKE MYKRYREESEA RM+
Sbjct: 636 QEFSLHVNHRAVDRAQFDERIKEKEMMYKRYREESEAARMI 676



 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 39/49 (79%)

Query: 72  LTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFES 120
           LT PK P  +TS R RPP++KSS ELE+E + KIPKFKARP+NKKI ++
Sbjct: 307 LTRPKEPEFETSQRIRPPRVKSSAELEEEMMAKIPKFKARPVNKKILQT 355


>Glyma18g26640.1 
          Length = 389

 Score =  322 bits (824), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 180/295 (61%), Positives = 202/295 (68%), Gaps = 25/295 (8%)

Query: 47  AHQSADSASIASTEVSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIP 106
           AH +AD ASIASTEVSHK      H+TEPKTP+LQTSLRA PPK+K+S ELEQEELEKIP
Sbjct: 100 AHHNADIASIASTEVSHKH-----HITEPKTPLLQTSLRAHPPKVKTSLELEQEELEKIP 154

Query: 107 KFKARPLNKKIFESKGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSE 166
           KFKA PLNKKIFESKGDIG+FC TKKHV+EPQEFHFAT+ERIPPPAA+ADLF KL L SE
Sbjct: 155 KFKAIPLNKKIFESKGDIGVFCLTKKHVSEPQEFHFATDERIPPPAAMADLFGKLSLNSE 214

Query: 167 GAHNHNPIPRKTTPNPFHLHTEERGAXXXXXXXXXXXXXXXXXXAARVPKANPYPYTTDF 226
            + NHNPIPR TTPNPFHLHTE+RGA                   AR+PKANPYPYTTD+
Sbjct: 215 PSRNHNPIPRNTTPNPFHLHTEKRGAEKEKKLAMDLLQKQWEEENARIPKANPYPYTTDY 274

Query: 227 AVIPPKPEPKHCTKPEPFQLESLVRHXXXXXXXXXXXXXXXXXXXXXXXFKAQPVLKEDP 286
            VIP KPEPK CT+P+PFQLESLV H                       FKAQP++K+  
Sbjct: 275 PVIPAKPEPKQCTRPKPFQLESLVTHEDEMQKEHKERHIMEKEEAQMRAFKAQPIIKD-- 332

Query: 287 IPVPEKVRKPLTQVQEFSLRLTNRAVDRAQFDEKIKEKETMYKRYREESEAERMV 341
                             L + + AVD AQFDE+  EKE MYKRYREESEA  M+
Sbjct: 333 ------------------LHVNHWAVDTAQFDERNTEKEMMYKRYREESEATTMI 369


>Glyma11g03060.1 
          Length = 521

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 103/201 (51%), Gaps = 24/201 (11%)

Query: 5   MPKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTEVSHK 64
           +P+FKARPLN+KIL  P+ P   RSTP  PEF EFHL T  RA Q   + S +S   +  
Sbjct: 295 VPRFKARPLNRKILNAPSFPLPKRSTPRLPEFLEFHLRTQERAMQHTSATSSSSLHCNDF 354

Query: 65  ENSWKPHLTEPKTPVLQTSLRARPPKIKSSFEL-EQEELEKIPKFKARPLNKKIFESKGD 123
           +     H     T V     R R  +  S+    + + L+    FKARPLNKKI  SKGD
Sbjct: 355 DKDLDKH-----TAVSAQENRIRDLRRPSALGAPKHDGLDFAHCFKARPLNKKILSSKGD 409

Query: 124 IGIFCHTKKHVTEPQEFHFATNERIP--PPAAIADLFDKLCLKSEGAHNHNP---IPR-- 176
           I +F + K+  T P EF+F T +R+   PP   ++LF K+ L SE   N+     +PR  
Sbjct: 410 IAVFLNRKQETTVPMEFNFHTEKRVQHNPP---SELFSKMSLTSEVQSNNGSQLKLPRHS 466

Query: 177 --------KTTPNPFHLHTEE 189
                   +   + FHL  +E
Sbjct: 467 RVFREDSKENIGSSFHLDVKE 487


>Glyma17g14600.2 
          Length = 326

 Score =  102 bits (253), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 93/175 (53%), Gaps = 22/175 (12%)

Query: 6   PKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIASTEVSHKE 65
           PKFKARPLN+KIL+ P++ P  RSTP  PEF+EFHL+T  RA Q   SA  +S      +
Sbjct: 121 PKFKARPLNRKILEAPSMLPPKRSTPRLPEFQEFHLKTFERAMQHT-SAMSSSFHYDDSD 179

Query: 66  NSWKPHLTEPKTPVLQTSLRARPPKIKS------SFELEQEELEKIPKFKARPLNKKIFE 119
             W  H          TS+ A   +IK       +     + L     FKA+PLNKKI  
Sbjct: 180 KGWDKH----------TSVSALENRIKDLRRPAAAAAPTNDGLGFTHIFKAQPLNKKILP 229

Query: 120 SKGDIGIFCHTKKHVTEPQEFHFATNERI--PPPAAIADLFDKLCLKSEGAHNHN 172
           SKG+ G+F ++K+  T P EF   T + +   PP    +LF KL L SEG  N+ 
Sbjct: 230 SKGNGGVFHNSKQETTVPMEFDLQTEKEVQHDPP---VELFSKLSLTSEGQPNNG 281


>Glyma07g12720.1 
          Length = 77

 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/86 (68%), Positives = 64/86 (74%), Gaps = 16/86 (18%)

Query: 46  RAHQSADSASIASTEVSHKEN------SWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQ 99
           RAH +AD+ASIASTEVSHK +      S K H+TEPKTP+LQTSLRA PPK         
Sbjct: 2   RAHHNADTASIASTEVSHKVSFRNNAPSRKHHITEPKTPLLQTSLRACPPK--------- 52

Query: 100 EELEKIPKFKARPLNKKIFESKGDIG 125
            ELEKIPK KARPLNKKIFESKGDIG
Sbjct: 53  -ELEKIPKAKARPLNKKIFESKGDIG 77


>Glyma17g14600.1 
          Length = 382

 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 89/171 (52%), Gaps = 36/171 (21%)

Query: 6   PKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARA--HQSADSASIASTEVSH 63
           PKFKARPLN+KIL+ P++ P  RSTP  PEF+EFHL+T  RA  H SA S+S    + S 
Sbjct: 199 PKFKARPLNRKILEAPSMLPPKRSTPRLPEFQEFHLKTFERAMQHTSAMSSSFHYDD-SD 257

Query: 64  KENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQEELEKIPKFKARPLNKKIFESKGD 123
           K   +K  +T                K   S              K++PLNKKI  SKG+
Sbjct: 258 KNQGFKKVITN---------------KCGDS-------------DKSQPLNKKILPSKGN 289

Query: 124 IGIFCHTKKHVTEPQEFHFATNERI--PPPAAIADLFDKLCLKSEGAHNHN 172
            G+F ++K+  T P EF   T + +   PP    +LF KL L SEG  N+ 
Sbjct: 290 GGVFHNSKQETTVPMEFDLQTEKEVQHDPP---VELFSKLSLTSEGQPNNG 337


>Glyma05g04130.1 
          Length = 329

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 97/179 (54%), Gaps = 27/179 (15%)

Query: 6   PKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARA--HQSADSASIASTEVSH 63
           P+FKARPLN+KIL+ P+L P  RSTP  PEF+EFHL+TL RA  H SA S+S+      H
Sbjct: 121 PRFKARPLNRKILEAPSLLPHKRSTPRLPEFQEFHLKTLERAMQHTSAMSSSL------H 174

Query: 64  KENSWKPHLTEPKTPVLQTSLRARPPKIKSSFELEQ----------EELEKIPKFKARPL 113
            ++S K  +   +     T++ A   +IK   +L +          + L     FKA+ L
Sbjct: 175 YDDSDKTKVIWLQGWDKHTTVSALENRIK---DLRRPAAAAAAPTDDGLGFTHIFKAQSL 231

Query: 114 NKKIFESKGDIGIFCHTKKHVTEPQEFHFATNERIPPPAAIADLFDKLCLKSEGAHNHN 172
           NKKI  SKG+ G+F ++K   T P       ++  PP     +LF KL L SEG  N+ 
Sbjct: 232 NKKILPSKGNGGVFHNSKHETTVPMTEKEVQHD--PP----IELFSKLSLTSEGQPNNG 284


>Glyma01g42300.1 
          Length = 426

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 14/124 (11%)

Query: 6   PKFKARPLNKKILQTPTLPPMPRSTPHPPEFKEFHLETLARAHQSADSASIAS------- 58
           P F+ARPLN+KIL  P+LP   RSTP  PEF+EFHL+T  RA Q   + S +S       
Sbjct: 304 PIFRARPLNRKILNAPSLPLPKRSTPRLPEFQEFHLKTQERAMQHTSATSTSSLHCNDSD 363

Query: 59  -----TEVSHKENSWKPHLTEPKTPVLQTSLRARPPKIKSSFEL-EQEELEKIPKFKARP 112
                +++   E  W   L + +    Q + R R  +  S+    + + L+    FKARP
Sbjct: 364 KIYMISDLRGTEVCWLQDLDKHRAVSAQEN-RIRDLRRPSAMGAPKHDGLDFAHSFKARP 422

Query: 113 LNKK 116
           LNKK
Sbjct: 423 LNKK 426