Miyakogusa Predicted Gene

Lj0g3v0171439.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0171439.1 Non Chatacterized Hit- tr|I1NH37|I1NH37_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,89.14,0,60S RIBOSOMAL
PROTEIN L3-RELATED,NULL; seg,NULL; no description,NULL;
Ribosomal_L3,Ribosomal protein,CUFF.11615.1
         (286 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g30810.1                                                       529   e-150
Glyma10g36780.1                                                       528   e-150
Glyma12g36940.1                                                       483   e-137
Glyma09g00280.1                                                       479   e-135

>Glyma20g30810.1 
          Length = 389

 Score =  529 bits (1362), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 259/304 (85%), Positives = 270/304 (88%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDPSK+PKLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRG+RTLNTVWAQHLSEE+KRRFY 
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q+E+EEGKKN++AQLEK+KKYATVVRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           IMEIQVNGGT+AQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR                  SA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300

Query: 283 EFDR 286
           EFDR
Sbjct: 301 EFDR 304


>Glyma10g36780.1 
          Length = 389

 Score =  528 bits (1359), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 258/304 (84%), Positives = 270/304 (88%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRAARHRGKVK+FPKDDPSK+PKLTAFLGYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRG+RTLNTVWAQHLSEE+KRRFY 
Sbjct: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          Q+E+EEGKKN++AQLEK+KKYATVVRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           IMEIQVNGG++AQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGSIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR                  SA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300

Query: 283 EFDR 286
           EFDR
Sbjct: 301 EFDR 304


>Glyma12g36940.1 
          Length = 389

 Score =  483 bits (1243), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 242/304 (79%), Positives = 266/304 (87%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVK+FPKD+PS+  +LTAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTAFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRG+RTLNT+WAQHLSEEVKRRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHLSEEVKRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          ++E+EEGKK++++QLEK+KKYATV+RVLAHTQIRK+KGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTV QKVD+AYSFFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR                  SAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKADQESHSAIT 300

Query: 283 EFDR 286
           EFDR
Sbjct: 301 EFDR 304


>Glyma09g00280.1 
          Length = 389

 Score =  479 bits (1234), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 241/304 (79%), Positives = 264/304 (86%), Gaps = 18/304 (5%)

Query: 1   MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
           MSHRKFEHPRHGSLGFLPRKRA+RHRGKVK+FPKD+PS+   LTAF+GYKAGMTHIVREV
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCGLTAFVGYKAGMTHIVREV 60

Query: 61  EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYX 120
           EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRG+RTLNTVWAQHLSEEVKRRFY 
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 120

Query: 121 XXXXXXXXXXXXXXXQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
                          ++E+EEGKK++++QLEK+KKYATV+RVLAHTQIRK+KGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180

Query: 181 IMEIQVNGGTVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
           +MEIQVNGGTV QKVD+AYSFFEKQ+P+DAVF KDEMIDI+GVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFHKDEMIDIVGVTKGKGYEGVVTRWGVTR 240

Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR------------------SAIT 282
           LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR                  SAIT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKADHESHSAIT 300

Query: 283 EFDR 286
           EFDR
Sbjct: 301 EFDR 304