Miyakogusa Predicted Gene

Lj0g3v0171359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0171359.1 Non Chatacterized Hit- tr|D8RQG8|D8RQG8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,45.05,3e-16,PAXNEB,Elongator complex protein 4; SUBFAMILY NOT
NAMED,NULL; PAX6 NEIGHBOR PROTEIN (PAXNEB),NULL,CUFF.10755.1
         (194 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g11400.1                                                       325   2e-89
Glyma03g25730.1                                                       298   2e-81

>Glyma13g11400.1 
          Length = 361

 Score =  325 bits (833), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/196 (81%), Positives = 168/196 (85%), Gaps = 6/196 (3%)

Query: 1   MAATRPRASSFSRNVSTVTSQNPGLKHGPNGTMFISSGILDLDKILGGDFSLGSLVMIME 60
           MAATR R SSFSRNVSTVTSQN GLKHGPNGTMFISSGI DLDKILGG FSLGSLVM+ME
Sbjct: 1   MAATRARVSSFSRNVSTVTSQNHGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVME 60

Query: 61  DAEAPHHMLLLRNFMSQGLVHRQPLLYASASYNPKGFLGTLPCPGTSK------DLGHEK 114
           D EAPHHMLLLRNFMSQGLV +QPLLYASAS +PK FLGTLP P + K      DL HEK
Sbjct: 61  DPEAPHHMLLLRNFMSQGLVQKQPLLYASASRDPKSFLGTLPSPASPKGDNKSSDLSHEK 120

Query: 115 DLRIAWQYKKYFGEPQLNVNSNNGGQHDYCNDFDLRKPLDRHFFGGMNVYCLSFQDSPNR 174
           DLRIAWQYKKYFGEPQLN+N+NNGGQHDYCNDFDLRKPLDRHFF G NV C+S +DSPN 
Sbjct: 121 DLRIAWQYKKYFGEPQLNLNTNNGGQHDYCNDFDLRKPLDRHFFSGNNVDCVSIKDSPNL 180

Query: 175 ATLQDRCAGFLAQCSR 190
             LQD CAGFLA+ SR
Sbjct: 181 TALQDCCAGFLAKFSR 196


>Glyma03g25730.1 
          Length = 296

 Score =  298 bits (764), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/195 (76%), Positives = 159/195 (81%), Gaps = 16/195 (8%)

Query: 1   MAATRPRASSFSRNVSTVTSQNPGLKHGPNGTMFISSGILDLDKILGGDFSLGSLVMIME 60
           MAATR R SSFSRNVSTVTSQNPGLKHGPNGTMFISSGI DLDKILGG FSLGSLVM+ME
Sbjct: 1   MAATRARVSSFSRNVSTVTSQNPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVME 60

Query: 61  DAEAPHHMLLLRNFMSQGLVHRQPLLYASASYNPKGFLGTLPCPGTSK-----DLGHEKD 115
           D EAPHHMLLLRNFMSQGLV +QPLLYASAS +PK FLGTLP   + K     DLG EKD
Sbjct: 61  DPEAPHHMLLLRNFMSQGLVQKQPLLYASASRDPKSFLGTLPSLVSPKGDKSSDLGQEKD 120

Query: 116 LRIAWQYKKYFGEPQLNVNSNNGGQHDYCNDFDLRKPLDRHFFGGMNVYCLSFQDSPNRA 175
           LRIAWQYKKYF           GG HDYCNDFDLRKPLDRHFF G+NV C+S +DSPN  
Sbjct: 121 LRIAWQYKKYF-----------GGHHDYCNDFDLRKPLDRHFFSGINVDCVSIKDSPNLT 169

Query: 176 TLQDRCAGFLAQCSR 190
           +LQDRCAGFLA+ SR
Sbjct: 170 SLQDRCAGFLAKFSR 184