Miyakogusa Predicted Gene

Lj0g3v0171049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0171049.1 tr|Q93KF0|Q93KF0_9FIRM Beta-galactosidase
OS=Caldicellulosiruptor lactoaceticus GN=lac PE=4
SV=1,52.56,2e-19,Glyco_hydro_2_N,Glycoside hydrolase, family 2,
N-terminal; SUBFAMILY NOT NAMED,NULL; BETA-GALACTOSID,CUFF.10735.1
         (169 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g26700.1                                                       283   9e-77

>Glyma13g26700.1 
          Length = 1093

 Score =  283 bits (723), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 129/155 (83%), Positives = 138/155 (89%)

Query: 15  LASQNGYKVWEDPSFIKWRKRDPHVSLHCHESVEGSLKFWYQRNKVDFLVSQSAVWNDDA 74
           L SQNGYKVWEDPSFIKWRKRDPHV+LHCHES+EGSLK+WYQRNKVDFL SQSAVWNDDA
Sbjct: 1   LTSQNGYKVWEDPSFIKWRKRDPHVTLHCHESLEGSLKYWYQRNKVDFLASQSAVWNDDA 60

Query: 75  VNGALDSAAFWVKDLPFVKSLSGYWKFFLASNPNNVPTEFYESEFHDSEWSALPVPSNWQ 134
           V G+LD AAFWVKDLPFVKSLSGYWKFF+A +PNNVPT FYESEF DS W  LPVPSNWQ
Sbjct: 61  VQGSLDCAAFWVKDLPFVKSLSGYWKFFIADSPNNVPTYFYESEFQDSGWKTLPVPSNWQ 120

Query: 135 LHGFDRPIYTNTEYPFPLDPPSVPEENPTGWFRKF 169
           LHGFD PIYTN  YPFPLDPP +P ENPTG +R +
Sbjct: 121 LHGFDTPIYTNVVYPFPLDPPFIPVENPTGCYRTY 155