Miyakogusa Predicted Gene

Lj0g3v0170789.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0170789.2 Non Chatacterized Hit- tr|K4DH16|K4DH16_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,58,2e-18,seg,NULL,CUFF.10708.2
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02210.1                                                       144   3e-35
Glyma10g44040.1                                                        67   7e-12
Glyma20g38760.1                                                        64   6e-11
Glyma10g44030.1                                                        57   9e-09

>Glyma04g02210.1 
          Length = 322

 Score =  144 bits (363), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/126 (59%), Positives = 81/126 (64%), Gaps = 1/126 (0%)

Query: 17  KPDFNLVEYSPKPANNSPESIVEAKGGLYGEGTIEGKFDCGYLVSVKLGSEVLRGVLFHX 76
           +P+  +VEYSPKP +NSPES  E    L G GTIEGKFDCGYLVSVKLGSEVLRGVL+H 
Sbjct: 141 RPELAIVEYSPKPMDNSPESRAEDTSCLSGNGTIEGKFDCGYLVSVKLGSEVLRGVLYHP 200

Query: 77  XXXXXXXXXXXQDVGAIVPFNPKAXXXXXXXXXXXXWDPNYPKPNRSGYNFFFAAKHTKL 136
                       +  AIVP N K             WDPNYPKPNRSGYNFFFA KH  L
Sbjct: 201 EQLVPPPSIPKHE-SAIVPINRKPHRSGRRKKNKRRWDPNYPKPNRSGYNFFFAEKHYTL 259

Query: 137 KELYPN 142
           K LYPN
Sbjct: 260 KTLYPN 265


>Glyma10g44040.1 
          Length = 354

 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 9/99 (9%)

Query: 48  GTIEGKFDCGYLVSVKLGSEVLRGVLFHX------XXXXXXXXXXXQDVGAIVPFNPKAX 101
           G I+GKF+ GYLV+V +GSE L+GVL+                    +  A +  + +  
Sbjct: 132 GVIDGKFESGYLVTVTIGSEKLKGVLYQAPQNPVLVASHHSASAKNNNASASLGVHRRRR 191

Query: 102 XXXXXXXXXXXWDPNYPKPNRSGYNFFFAAKHTKLKELY 140
                       DP +PKPNRSGYNFFFA +H +LK L+
Sbjct: 192 RKKSEIKRR---DPAHPKPNRSGYNFFFAEQHARLKLLH 227


>Glyma20g38760.1 
          Length = 326

 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 3/96 (3%)

Query: 48  GTIEGKFDCGYLVSVKLGSEVLRGVLFHXXXXXXXXXXXXQDVGAIVPFNPKA---XXXX 104
           G I+GKF+ GYLV+V +GSE L+GVL+                      +          
Sbjct: 106 GVIDGKFESGYLVTVTIGSEKLKGVLYQAPQNPVLTASHHSASANNNNASASLGVHRRRR 165

Query: 105 XXXXXXXXWDPNYPKPNRSGYNFFFAAKHTKLKELY 140
                    DP +PKPNRSGYNFFFA +H +LK L+
Sbjct: 166 RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKLLH 201


>Glyma10g44030.1 
          Length = 117

 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%)

Query: 48  GTIEGKFDCGYLVSVKLGSEVLRGVLFHXXXXXXXXXXXXQDVGAIVPFNPKAXXXXXXX 107
           G I+ KF+ GY+V+V +GSE L GVL++             +       + +        
Sbjct: 13  GVIDQKFEGGYVVTVTMGSEQLNGVLYYAQEDSVLLPAPSHNNNNAAAASLQKKKRRRSK 72

Query: 108 XXXXXWDPNYPKPNRSGYNFFFAAKHTKLK 137
                 +P  PKP ++GYNFFFA +H +LK
Sbjct: 73  SEIKRRNPALPKPKKTGYNFFFAEEHARLK 102