Miyakogusa Predicted Gene

Lj0g3v0167399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0167399.1 tr|Q8W106|Q8W106_ARATH AT3g27930/K24A2_2
OS=Arabidopsis thaliana GN=At3g27930 PE=2
SV=1,58.75,3e-19,seg,NULL,CUFF.10507.1
         (179 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g01070.1                                                       157   5e-39

>Glyma19g01070.1 
          Length = 422

 Score =  157 bits (397), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 70/80 (87%), Positives = 78/80 (97%)

Query: 100 VSGPLDHKPEESITGNALFRWQSDVNDPHTFMDLYVSTSDPILRMRSCAYYPRYGFGAFG 159
           VSGPLDHKP++SI G+ALFRWQSDVNDPHTFMDLYVSTS+PIL+MRSCAYYP+YGFGAFG
Sbjct: 83  VSGPLDHKPKDSIAGDALFRWQSDVNDPHTFMDLYVSTSNPILQMRSCAYYPKYGFGAFG 142

Query: 160 VFPLLLRKREFSEDYGLMGL 179
           VFPLLL+KRE S+DYGLMGL
Sbjct: 143 VFPLLLKKRESSQDYGLMGL 162