Miyakogusa Predicted Gene

Lj0g3v0166089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0166089.1 Non Chatacterized Hit- tr|C4R705|C4R705_PICPG
Putative uncharacterized protein OS=Pichia pastoris
(s,37.31,8e-19,seg,NULL; OPA3,Optic atrophy 3-like; SUBFAMILY NOT
NAMED,NULL; OPTIC ATROPHY 3 PROTEIN (OPA3),Optic ,CUFF.10411.1
         (170 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g43900.1                                                       228   2e-60
Glyma10g07930.1                                                       177   7e-45
Glyma06g43900.2                                                       164   4e-41
Glyma12g14010.1                                                       164   4e-41

>Glyma06g43900.1 
          Length = 168

 Score =  228 bits (582), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/167 (65%), Positives = 125/167 (74%)

Query: 1   MVVLPLVKLGTLALKTACKPIANRLKKEAGYHPKFRTFIISIAQANHRFSTRMQRRIYGN 60
           MVV P+VKL TLAL+TACKPIANRLKKEAGYHPKFR FIISIAQANHR +TR+QRRIYG+
Sbjct: 1   MVVFPVVKLATLALRTACKPIANRLKKEAGYHPKFRNFIISIAQANHRLTTRVQRRIYGH 60

Query: 61  TTDAAIRPLNEEKAVQAAADMLGELFVFTVAGAAVIFEVXXXXXXXXXXXXXXXXXXXXM 120
            TD AI PLNEEKAVQAAAD+LGELFVF+VAGAA+IFEV                    +
Sbjct: 61  ATDVAIHPLNEEKAVQAAADLLGELFVFSVAGAAIIFEVQRSSRSEARKEELRRQEIQEI 120

Query: 121 KTRNEEMARKIXXXXXXXXXXDQLARARGLAGVLNFRHTHTSEDKKS 167
           KT+NEE+AR+I          +QL+R RGL G LNFRHT  SED+KS
Sbjct: 121 KTKNEELAREIELLAQKLEELEQLSRGRGLLGTLNFRHTRVSEDRKS 167


>Glyma10g07930.1 
          Length = 169

 Score =  177 bits (448), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 113/168 (67%)

Query: 2   VVLPLVKLGTLALKTACKPIANRLKKEAGYHPKFRTFIISIAQANHRFSTRMQRRIYGNT 61
           +VLPL+KLGTLA+KT  KP+A+RLK++A  HP+FR  I+ +AQ+NH+ +T+MQRRIYG+ 
Sbjct: 1   MVLPLLKLGTLAVKTLSKPVASRLKQQAALHPRFRELIVRMAQSNHQITTKMQRRIYGHA 60

Query: 62  TDAAIRPLNEEKAVQAAADMLGELFVFTVAGAAVIFEVXXXXXXXXXXXXXXXXXXXXMK 121
           TD  IRPLNEEKAVQAA D++GELFVF+VAG  +IFEV                    +K
Sbjct: 61  TDVEIRPLNEEKAVQAAVDLIGELFVFSVAGVLLIFEVQRSARSEARKEEQRKQELQDVK 120

Query: 122 TRNEEMARKIXXXXXXXXXXDQLARARGLAGVLNFRHTHTSEDKKSKS 169
            +NE +A ++          +Q+AR RGL G+LNFR+ +T   K  K+
Sbjct: 121 QKNENLAEEVELLKHRIQELEQMARGRGLIGILNFRNGNTEIGKAEKT 168


>Glyma06g43900.2 
          Length = 144

 Score =  164 bits (415), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 79/98 (80%), Positives = 87/98 (88%), Gaps = 2/98 (2%)

Query: 1  MVVLPLVKLGTLALKTACKPIANRLKKEAGYHPKFRTFIISIAQANHRFSTRMQRRIYGN 60
          MVV P+VKL TLAL+TACKPIANRLKKEAGYHPKFR FIISIAQANHR +TR+QRRIYG+
Sbjct: 1  MVVFPVVKLATLALRTACKPIANRLKKEAGYHPKFRNFIISIAQANHRLTTRVQRRIYGH 60

Query: 61 TTDAAIRPLNEEKAVQAAADMLGELFVFT--VAGAAVI 96
           TD AI PLNEEKAVQAAAD+LGELFVF+  VA A +I
Sbjct: 61 ATDVAIHPLNEEKAVQAAADLLGELFVFSTNVADAILI 98


>Glyma12g14010.1 
          Length = 89

 Score =  164 bits (415), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 76/89 (85%), Positives = 83/89 (93%)

Query: 1  MVVLPLVKLGTLALKTACKPIANRLKKEAGYHPKFRTFIISIAQANHRFSTRMQRRIYGN 60
          MVVLP+VKL TLAL+TACKPIANRLKKEAGYHPKFR FIISIAQANHR +TR+QRRIY +
Sbjct: 1  MVVLPVVKLATLALRTACKPIANRLKKEAGYHPKFRNFIISIAQANHRLTTRVQRRIYSH 60

Query: 61 TTDAAIRPLNEEKAVQAAADMLGELFVFT 89
           TD AIRPLNEEKAVQAAAD+LGELFVF+
Sbjct: 61 ATDVAIRPLNEEKAVQAAADLLGELFVFS 89