Miyakogusa Predicted Gene

Lj0g3v0165779.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0165779.2 Non Chatacterized Hit- tr|I1H2B1|I1H2B1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.98,8e-19,seg,NULL,CUFF.10387.2
         (242 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g36810.1                                                       270   9e-73
Glyma20g30190.1                                                       157   8e-39
Glyma20g30200.1                                                       144   6e-35

>Glyma08g36810.1 
          Length = 247

 Score =  270 bits (690), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 147/251 (58%), Positives = 174/251 (69%), Gaps = 13/251 (5%)

Query: 1   MGGREDTSNSNLKEEIFHNFKNFMTGITKIDELVNAGSKLLSGFQQALEFMRKPPIDTKS 60
           M  RE  S S+L EEI H F++FMT ITKIDEL  AGS+LLSGFQQAL+F+R+PPIDT S
Sbjct: 1   MESREGKSISDLYEEICHKFRDFMTEITKIDELGIAGSRLLSGFQQALDFIRRPPIDTNS 60

Query: 61  KLVNKIIVANETKRVKSYVNSGCRNPNNDVQSVTNLHSCKNGLNDIISKAKVILGELEGL 120
           KLV+KIIVANET+RVK+Y+NSGCR  N  +QSVTNLHS  +GL + ISK K IL ELEGL
Sbjct: 61  KLVHKIIVANETERVKAYINSGCRKLNESIQSVTNLHSDTHGLCNHISKVKEILNELEGL 120

Query: 121 LGDVTSSIESLHGN-LALAAPDCGVKLYAQA--------SYNDLEENAALSHSQSTDVTI 171
           LGDVT++I++  GN LAL+  D  V+L  Q         + N L+E       +   +  
Sbjct: 121 LGDVTNAIQTTDGNLLALSDLDFNVELNEQCHSLFGTNTTLNSLKERCG----EKGKLVK 176

Query: 172 TTKKSIDVASLAALMAVIYSMVKQDYLMQERIVXXXXXXXXXXXXXXYCQMWPLRPFIND 231
             KKS DVA LA LMA IYSMV QDYLMQE+IV              YCQMW LRPFIND
Sbjct: 177 IKKKSADVAYLAMLMAFIYSMVNQDYLMQEKIVSALDIKMPSEELESYCQMWSLRPFIND 236

Query: 232 EIMHQAWKHVH 242
           EIMHQAW+H+H
Sbjct: 237 EIMHQAWEHIH 247


>Glyma20g30190.1 
          Length = 150

 Score =  157 bits (398), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 88/149 (59%), Positives = 102/149 (68%), Gaps = 4/149 (2%)

Query: 98  SCKNGLNDIISKAKVILGELEGLLGDVTSSIESLHGNL-ALAAPDCGVKLYAQASYNDL- 155
           SC +GL + ISKAK IL ELEGLLGDVT++I++  GNL AL+  D  V+L    S +   
Sbjct: 2   SCTHGLCNHISKAKEILNELEGLLGDVTNAIQTTDGNLLALSDLDFDVELNEPNSNDTFT 61

Query: 156 -EENAALSHSQSTDVTITTKK-SIDVASLAALMAVIYSMVKQDYLMQERIVXXXXXXXXX 213
            EE  ALS SQS DVT T KK SIDV  LA +MA IYSMVKQDYLMQE+IV         
Sbjct: 62  QEEKDALSRSQSPDVTTTKKKKSIDVPHLAMVMAFIYSMVKQDYLMQEKIVSALDVKMPS 121

Query: 214 XXXXXYCQMWPLRPFINDEIMHQAWKHVH 242
                YCQMW LRPFINDEI+HQAW+H+H
Sbjct: 122 EELESYCQMWSLRPFINDEIVHQAWEHIH 150


>Glyma20g30200.1 
          Length = 107

 Score =  144 bits (364), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 72/103 (69%), Positives = 83/103 (80%), Gaps = 3/103 (2%)

Query: 1   MGGREDTSNSNLKEEIFHNFKNFMTGITKIDELVNAGSKLLSGFQQALEFMRKPPIDTKS 60
           M  RE  S S+L+EE FH F++FMTGITKIDEL  AGSKLLSGFQQALEF+R+PPID  S
Sbjct: 1   MESREGKSISDLEEEFFHKFRDFMTGITKIDELGIAGSKLLSGFQQALEFIRRPPIDMNS 60

Query: 61  KLVNKIIVANETKRVKSYVNSGCRNPNNDVQSVTNLHSCKNGL 103
           KLV+KIIVANET+RVK+Y+NSGCR  N  +QSVTN   CK  L
Sbjct: 61  KLVHKIIVANETERVKAYINSGCRKLNESIQSVTN---CKYHL 100