Miyakogusa Predicted Gene

Lj0g3v0165409.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0165409.1 tr|G7IYB6|G7IYB6_MEDTR Protein
TRIGALACTOSYLDIACYLGLYCEROL OS=Medicago truncatula GN=MTR_3g005100
PE,85.44,0,ABC TRANSPORTER PERMEASE PROTEIN-RELATED,NULL;
Permease,Permease domain; TIGR00056: conserved hypoth,CUFF.10374.1
         (367 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g35060.1                                                       580   e-166
Glyma10g32520.1                                                       577   e-165

>Glyma20g35060.1 
          Length = 356

 Score =  580 bits (1495), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 294/371 (79%), Positives = 314/371 (84%), Gaps = 19/371 (5%)

Query: 1   MQAASYSHPVFCFSCR---TNANIS-PVKIRAPYPSHLNWKCEFNGRPHIFKNSAIPIKP 56
           MQ  SYSHP+FCFSCR   TN      VK RAPYPS L  KC FNGRP ++ + + PIKP
Sbjct: 1   MQTTSYSHPLFCFSCRNISTNGKSKGSVKFRAPYPSQLGRKCGFNGRPRVYISPS-PIKP 59

Query: 57  NRLYVLPDTGDGHPSASMIDGEMNTNHASASIIDDEMNPNHAPNSISPPFLSNWSPPRYL 116
           NRLYVL +TGD HPSA  +D              DEMN NHAPN +SP FLSNWSPPRYL
Sbjct: 60  NRLYVLHNTGDNHPSAFSVD--------------DEMNTNHAPNGMSPTFLSNWSPPRYL 105

Query: 117 WRGLSVLVLAGQVIMKILKGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVRE 176
           WRGLSVL+LAGQV++K LKGKIHWRNTLQQLERVGP+SVGVCLLTSAFVGMAFTIQFVRE
Sbjct: 106 WRGLSVLILAGQVVVKTLKGKIHWRNTLQQLERVGPKSVGVCLLTSAFVGMAFTIQFVRE 165

Query: 177 FTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGS 236
           FTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQ DTLRVLGS
Sbjct: 166 FTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGS 225

Query: 237 DPVDYLVTPRVIASCIAXXXXXXXXXXXGMASSAILADGVYGVSINIILDSAQRALRPWD 296
           DPVDYLVTPRV+A+CIA           GMASSA+LADGVYG+SINII+DSAQRALR WD
Sbjct: 226 DPVDYLVTPRVLATCIALPLLTLLCFTLGMASSALLADGVYGLSINIIMDSAQRALRSWD 285

Query: 297 IISAMIKSQVFGAIISIVSCAWGVTTMGGAKGVGESTTSAVVLSLVGIFIADFALSCCFF 356
           IISAMIKSQVFGAIISIVSCAWGVTT+GGAKGVGESTTSAVV+SLVGIFIADFALS  FF
Sbjct: 286 IISAMIKSQVFGAIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVGIFIADFALSYVFF 345

Query: 357 QGAGDQLKNCM 367
           QGAGDQLKNC+
Sbjct: 346 QGAGDQLKNCV 356


>Glyma10g32520.1 
          Length = 356

 Score =  577 bits (1488), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 293/371 (78%), Positives = 312/371 (84%), Gaps = 19/371 (5%)

Query: 1   MQAASYSHPVFCFSCR---TNANIS-PVKIRAPYPSHLNWKCEFNGRPHIFKNSAIPIKP 56
           MQ   +SHP+FCFSCR   TN      VK R  YPS L+ KCEFNG PH++ NS  PIKP
Sbjct: 1   MQTTLFSHPLFCFSCRNISTNGKTKCSVKFRTSYPSQLDRKCEFNGIPHVY-NSPSPIKP 59

Query: 57  NRLYVLPDTGDGHPSASMIDGEMNTNHASASIIDDEMNPNHAPNSISPPFLSNWSPPRYL 116
           NRL+VL +TGD              +H SA  +DDEMN NHAPN  SP FLSNWSPPRYL
Sbjct: 60  NRLFVLHNTGD--------------SHLSAFTVDDEMNTNHAPNGTSPTFLSNWSPPRYL 105

Query: 117 WRGLSVLVLAGQVIMKILKGKIHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVRE 176
           WRGLSVL+LAGQVI+K LKGKIHWRNTLQQLERVGP+SVGVCLLTSAFVGMAFTIQFVRE
Sbjct: 106 WRGLSVLILAGQVIVKTLKGKIHWRNTLQQLERVGPKSVGVCLLTSAFVGMAFTIQFVRE 165

Query: 177 FTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQIDTLRVLGS 236
           FTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQ DTLRVLGS
Sbjct: 166 FTRLGLNRSVGGVLALAFSRELSPVVTAIVVAGRIGSAFAAELGTMQVSEQTDTLRVLGS 225

Query: 237 DPVDYLVTPRVIASCIAXXXXXXXXXXXGMASSAILADGVYGVSINIILDSAQRALRPWD 296
           DPVDYLVTPRV+A+CIA           GMASSA+LADGVYGVSINIILDSAQRALR WD
Sbjct: 226 DPVDYLVTPRVLATCIALPLLTLLCFTLGMASSALLADGVYGVSINIILDSAQRALRSWD 285

Query: 297 IISAMIKSQVFGAIISIVSCAWGVTTMGGAKGVGESTTSAVVLSLVGIFIADFALSCCFF 356
           IISAMIKSQVFGAIISIVSCAWGVTT+GGAKGVGESTTSAVV+SLVG+FIADFALS  FF
Sbjct: 286 IISAMIKSQVFGAIISIVSCAWGVTTLGGAKGVGESTTSAVVISLVGVFIADFALSYVFF 345

Query: 357 QGAGDQLKNCM 367
           QGAGDQLKNC+
Sbjct: 346 QGAGDQLKNCI 356