Miyakogusa Predicted Gene

Lj0g3v0165139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0165139.1 tr|A9RWQ1|A9RWQ1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_206317,46.02,2e-18,GLYCOSYLTRANSFERASE,GPI
mannosyltransferase; Glyco_transf_22,GPI mannosyltransferase;
seg,NULL,CUFF.10361.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g13150.1                                                       163   4e-41
Glyma03g25680.1                                                       140   4e-34

>Glyma07g13150.1 
          Length = 514

 Score =  163 bits (413), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 81/101 (80%), Positives = 83/101 (82%), Gaps = 14/101 (13%)

Query: 1   MALGCIILYTLRFFRHQIRSKFGHQVEAFFVILTSVQFHFLFYCTRPLPNILALGLVNVM 60
           MALGCIILYTLRFFRHQIR+KFGHQVEAFFVILT+ QFHFLFYCTRPLPNILALGL    
Sbjct: 121 MALGCIILYTLRFFRHQIRNKFGHQVEAFFVILTATQFHFLFYCTRPLPNILALGL---- 176

Query: 61  VLYFLLIYFVVNLAYGYWFEGRFYAALNSLIFATAVFRCDM 101
                     VNLAYGYWF GRFYAALNSLIF T VFRCDM
Sbjct: 177 ----------VNLAYGYWFRGRFYAALNSLIFTTTVFRCDM 207


>Glyma03g25680.1 
          Length = 473

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 71/97 (73%), Positives = 76/97 (78%), Gaps = 14/97 (14%)

Query: 1   MALGCIILYTLRFFRHQIRSKFGHQVEAFFVILTSVQFHFLFYCTRPLPNILALGLVNVM 60
           MALG I+LYTLRFFRHQIR+KFGHQVEAFFVILT+ QFHFLFYCTRPLPNILAL L    
Sbjct: 104 MALGGIVLYTLRFFRHQIRNKFGHQVEAFFVILTATQFHFLFYCTRPLPNILALSL---- 159

Query: 61  VLYFLLIYFVVNLAYGYWFEGRFYAALNSLIFATAVF 97
                     VNLAYGYWFEGRFYAALNSL    +V+
Sbjct: 160 ----------VNLAYGYWFEGRFYAALNSLTKKISVW 186