Miyakogusa Predicted Gene

Lj0g3v0165119.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0165119.1 Non Chatacterized Hit- tr|C5YD36|C5YD36_SORBI
Putative uncharacterized protein Sb06g024190
OS=Sorghu,47.37,0.000000000007,seg,NULL,CUFF.10342.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g25670.1                                                       143   4e-35

>Glyma03g25670.1 
          Length = 555

 Score =  143 bits (361), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 65/79 (82%), Positives = 73/79 (92%)

Query: 50  VTCSISKIHNYGTVDYERRPIVRWNDIYRRISLMENPELGSVSVLNQWENEGKNLTKWEL 109
           VTCSIS IH+YGTVDYERRPIVRWND+YRRISL +NP++GS  VLNQWENEG++LTKWEL
Sbjct: 56  VTCSISNIHSYGTVDYERRPIVRWNDVYRRISLNQNPQVGSAEVLNQWENEGRHLTKWEL 115

Query: 110 SRVVKELRKYRRHQRALEV 128
           SRVVKELRKY+R  RALEV
Sbjct: 116 SRVVKELRKYKRFPRALEV 134