Miyakogusa Predicted Gene

Lj0g3v0164299.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164299.1 Non Chatacterized Hit- tr|K3YWL7|K3YWL7_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si018663,42.4,2e-17,coiled-coil,NULL,CUFF.10267.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g06070.1                                                       207   2e-54
Glyma13g20360.1                                                       166   6e-42

>Glyma10g06070.1 
          Length = 128

 Score =  207 bits (527), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 96/128 (75%), Positives = 116/128 (90%)

Query: 1   MVGVKRSSILLTLAFLMFMGIAVYFRLWAIDYNMSSDDTELIRRQFDLANREAMDESAEW 60
           M+G +R  IL TLAFLM MGIAVYFRLWAI YN+SSDDT+L+R+QFD+ANREAMDESAEW
Sbjct: 1   MMGARRRCILATLAFLMLMGIAVYFRLWAIHYNLSSDDTQLLRQQFDIANREAMDESAEW 60

Query: 61  RLKYDEEVNRANKCLKELRAFQESSKKAEDASGINHKLAILQKENAILLERVETLKREVE 120
           RL+YD+EV+R  KCL+EL+ FQESS+K +DAS INHKLAILQKENA+LLER+ETLKRE+E
Sbjct: 61  RLRYDQEVDRTKKCLQELQVFQESSQKGQDASDINHKLAILQKENAVLLERLETLKRELE 120

Query: 121 DEKSKCNS 128
           +E+ KC+S
Sbjct: 121 EERLKCSS 128


>Glyma13g20360.1 
          Length = 117

 Score =  166 bits (420), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 83/132 (62%), Positives = 101/132 (76%), Gaps = 15/132 (11%)

Query: 1   MVGVKRSSILLTLAFLMFMGIAVYFRLWAIDYNMSSDDTELIRRQFDLANREAMDESAEW 60
           M   +R SIL TLAFLM MGIA+YFRLWAI YN+SSDDT+L+R QFD+ANREAMDESAEW
Sbjct: 1   MGARRRRSILATLAFLMLMGIALYFRLWAIHYNLSSDDTQLLRLQFDIANREAMDESAEW 60

Query: 61  RLKYDEEVNRANKCLKELRAFQESSKKAEDASGINHKLAILQKENAILLERVETLKREVE 120
           RL+YDEEV+R NKCL++L+               NH   +   ENA+LLER+ETLKRE+E
Sbjct: 61  RLRYDEEVDRTNKCLQQLQLH-------------NHTFTV--NENAVLLERLETLKRELE 105

Query: 121 DEKSKCNSRYMN 132
           +E+ KC+SRYMN
Sbjct: 106 EERLKCSSRYMN 117