Miyakogusa Predicted Gene

Lj0g3v0164019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164019.1 Non Chatacterized Hit- tr|F6HX39|F6HX39_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,81.54,0.00000000000002,seg,NULL; NARP1,N-terminal
acetyltransferase A, auxiliary subunit,CUFF.10244.1
         (99 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g03850.1                                                        52   1e-07
Glyma08g22180.1                                                        52   2e-07

>Glyma07g03850.1 
          Length = 901

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 38/65 (58%)

Query: 15  DEEMSKLLPSQKNKMXXXXXXXXXXXXXXXXXXXXXLSASEVFKSRKRHVKPVNPDPHGE 74
           D+ MSKLLPSQK KM                      SAS V KS KRHVKPV+PDP+GE
Sbjct: 585 DDNMSKLLPSQKKKMRQKQRKAEARAKKEAEEKNEESSASGVSKSGKRHVKPVDPDPNGE 644

Query: 75  KLLQI 79
           KLLQ+
Sbjct: 645 KLLQV 649


>Glyma08g22180.1 
          Length = 901

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 38/65 (58%)

Query: 15  DEEMSKLLPSQKNKMXXXXXXXXXXXXXXXXXXXXXLSASEVFKSRKRHVKPVNPDPHGE 74
           D+ MSKLLPSQK KM                      SAS V KS KRH+KPV+PDP+GE
Sbjct: 585 DDNMSKLLPSQKKKMRQKQRKAEARAKKEAEEKNEESSASGVSKSGKRHIKPVDPDPNGE 644

Query: 75  KLLQI 79
           KLLQ+
Sbjct: 645 KLLQV 649