Miyakogusa Predicted Gene

Lj0g3v0163939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163939.1 Non Chatacterized Hit- tr|D8RZ39|D8RZ39_SELML
Putative uncharacterized protein OS=Selaginella
moelle,33.04,1e-18,SUBFAMILY NOT NAMED,NULL; RING FINGER
PROTEIN-RELATED,NULL; seg,NULL; coiled-coil,NULL,CUFF.10237.1
         (254 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g26750.1                                                       289   2e-78
Glyma01g13450.1                                                       206   2e-53

>Glyma11g26750.1 
          Length = 531

 Score =  289 bits (740), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 150/214 (70%), Positives = 163/214 (76%)

Query: 41  LDIAVXXXXXXXXXXXXXXXXXEYAALENKLSQLNESQHSYDSALTVVKKSWEQMVNDLE 100
           LDI V                 EYA LEN+ S L ESQ SYDS L VVKKSWEQ+V+DLE
Sbjct: 1   LDIVVLQYQNQKLTQKLETQKLEYAGLENRFSLLKESQKSYDSTLAVVKKSWEQLVDDLE 60

Query: 101 SSSEGTRESSCKSDSRFASVMNDCSSSTVQDVFLSRLMQTGATESSSTYRFANQMEEHNE 160
             SE TRESS K +SRFAS+M D S STVQDVFLSRLMQT ATE +STY FANQMEEH E
Sbjct: 61  LCSERTRESSRKINSRFASIMEDGSPSTVQDVFLSRLMQTDATECASTYNFANQMEEHRE 120

Query: 161 ITAEKAKSILKNVVTATNNLWGMKDGLHTALLKKLPGDVSCRQKLSADLEVEVKNLRLAF 220
           IT EKAKSILKN+VTA NNLW + DGLHTA LKKLPG   CRQKLS+DLEV VKNLRL F
Sbjct: 121 ITTEKAKSILKNMVTAVNNLWVLMDGLHTAFLKKLPGGDLCRQKLSSDLEVIVKNLRLEF 180

Query: 221 SELHLKHKSLASELQFQKDHDAKNKADLKRLKGK 254
           SELH KHKSLASE Q Q+D +AKNKADL+RLKG+
Sbjct: 181 SELHSKHKSLASEFQIQRDLNAKNKADLERLKGE 214


>Glyma01g13450.1 
          Length = 149

 Score =  206 bits (524), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/140 (75%), Positives = 114/140 (81%)

Query: 113 SDSRFASVMNDCSSSTVQDVFLSRLMQTGATESSSTYRFANQMEEHNEITAEKAKSILKN 172
           + SR    +   S STVQDVFLSRLMQT ATE +S+Y FANQMEEH EIT EKAKSILKN
Sbjct: 9   TPSRAGCRLRHGSPSTVQDVFLSRLMQTDATECASSYNFANQMEEHREITIEKAKSILKN 68

Query: 173 VVTATNNLWGMKDGLHTALLKKLPGDVSCRQKLSADLEVEVKNLRLAFSELHLKHKSLAS 232
           +VTA NNLW + DGLHTALLKKLPGD  CRQKLS+DLEV VKNLRL FSELHLKHKSLAS
Sbjct: 69  MVTAVNNLWVLMDGLHTALLKKLPGDDLCRQKLSSDLEVIVKNLRLEFSELHLKHKSLAS 128

Query: 233 ELQFQKDHDAKNKADLKRLK 252
           E   Q+  DAKNKADL+RLK
Sbjct: 129 EFLIQRGLDAKNKADLERLK 148