Miyakogusa Predicted Gene

Lj0g3v0163179.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0163179.1 Non Chatacterized Hit- tr|B9RRG6|B9RRG6_RICCO
Chromatin regulatory protein sir2, putative OS=Ricinus,60.44,3e-19,
,gene.g12508.t1.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g38730.1                                                       147   4e-36
Glyma06g16260.1                                                       132   1e-31

>Glyma04g38730.1 
          Length = 393

 Score =  147 bits (371), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 76/122 (62%), Positives = 89/122 (72%), Gaps = 13/122 (10%)

Query: 35  DNIEPNTSRTENWHFARRGSSSRLLPFKGCVKFVQTSWRISAPGTLPINDEKAPSNALRD 94
           D ++P   R+ NWH A+RG   RL+ FKG  + V T+ RIS PGTLP  DEKA SN  RD
Sbjct: 33  DIVQP---RSGNWHLAKRGG--RLISFKGRARLVHTTCRISVPGTLPRTDEKASSNISRD 87

Query: 95  KKVVPDADPPSAKDLNLLYQFFDQSTKLTVLTGAGISTD--------PNGAYSSGFRPIT 146
           KK VP+ADPPS KD+ LLY+F D+STKLTVLTGAGIST+        PNGAYSSGF+PIT
Sbjct: 88  KKTVPEADPPSIKDVQLLYEFLDRSTKLTVLTGAGISTECGIPDYRSPNGAYSSGFKPIT 147

Query: 147 HQ 148
           HQ
Sbjct: 148 HQ 149


>Glyma06g16260.1 
          Length = 360

 Score =  132 bits (332), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/114 (59%), Positives = 80/114 (70%), Gaps = 10/114 (8%)

Query: 43  RTENWHFARRGSSSRLLPFKGCVKFVQTSWRISAPGTLPINDEKAPSNALRDKKVVPDAD 102
           R+ + H A+RG   RL+  K C + V T  RIS PGTLP  D K  +N  RDKK VP+AD
Sbjct: 5   RSGHSHLAKRGG--RLISCKVCARLVHTMCRISVPGTLPRTDGKTSTNISRDKKTVPEAD 62

Query: 103 PPSAKDLNLLYQFFDQSTKLTVLTGAGISTD--------PNGAYSSGFRPITHQ 148
           PPS KD+ LLY+F D+STKLTVLTGAGIST+        PNGAYSSGF+PITHQ
Sbjct: 63  PPSIKDVQLLYEFLDRSTKLTVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQ 116