Miyakogusa Predicted Gene
- Lj0g3v0163059.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0163059.1 tr|A9RAW2|A9RAW2_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,40.6,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.10862.1
(209 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g11430.1 204 7e-53
Glyma11g08300.1 151 4e-37
Glyma01g36960.1 150 8e-37
Glyma02g05230.1 136 2e-32
Glyma06g17670.1 106 2e-23
Glyma12g14390.1 100 2e-21
Glyma16g08490.1 84 1e-16
Glyma01g01150.1 79 4e-15
Glyma05g35850.1 74 2e-13
Glyma12g15240.1 69 3e-12
Glyma08g03770.1 67 1e-11
>Glyma11g11430.1
Length = 431
Score = 204 bits (518), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 138/188 (73%), Gaps = 18/188 (9%)
Query: 1 MSLPHQSLYPQVHSTNPDANSPFFH-------------ASTSSSMYPSVGNPTTAQQPSE 47
M S YP+V STNPDANSPF + T+ ++ N TT ++ E
Sbjct: 1 MFFQQSSFYPRVDSTNPDANSPFSNPAPSSSSSSIYPSVETTENLIWEEPN-TTTEEAME 59
Query: 48 HVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAV 107
+VLVTVPG ILHLIEKDSSVHLASGDL I +L EGD+VV VLA VGDQVQWPLAKDVSAV
Sbjct: 60 NVLVTVPGAILHLIEKDSSVHLASGDLTISTLGEGDKVVAVLACVGDQVQWPLAKDVSAV 119
Query: 108 KLDDSHYFFTIRVPKEGGE---FEVLNYGVTVAAEGRGRG-KELDEVLEKYCFLSVEKVE 163
KLD+SHYFFT++VP+E GE FEVLNYG+TVAA+G+ R +ELDEVL+KY FLS EK++
Sbjct: 120 KLDESHYFFTVQVPQEHGEEKGFEVLNYGLTVAAKGQERVLRELDEVLDKYSFLSKEKLK 179
Query: 164 GLGNWAVL 171
G+G W VL
Sbjct: 180 GVGGWEVL 187
>Glyma11g08300.1
Length = 447
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 115/186 (61%), Gaps = 27/186 (14%)
Query: 4 PHQ--SLYPQVHSTNPDANSPFFHASTSSS----MYPSVG-----------------NPT 40
P+Q SLYPQV +NPDA SP + SSS +YPSV +P+
Sbjct: 6 PNQRNSLYPQVIDSNPDAPSPLLITNHSSSSQPCLYPSVDYNDLVENLFSEDATAACSPS 65
Query: 41 TAQQPSEHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPL 100
+ +E VL +PG IL+L++KD SV LA GD ++I L +GD V V A V D++QWPL
Sbjct: 66 APPEATEEVLFRIPGAILNLVDKDYSVELACGDFSVIRLRQGDNAVAVYARVADEIQWPL 125
Query: 101 AKDVSAVKLDDSHYFFTIRVPK---EGGEFEVLNYGVTVAAEGRGR-GKELDEVLEKYCF 156
AKD +AVKLDDSHYFF+ RVPK E +VL+YG+T+A++G+ R K+LD VLE
Sbjct: 126 AKDAAAVKLDDSHYFFSFRVPKGFDPDEEEDVLSYGLTIASKGQERLVKDLDAVLENCSC 185
Query: 157 LSVEKV 162
SV+ V
Sbjct: 186 FSVQSV 191
>Glyma01g36960.1
Length = 448
Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 117/187 (62%), Gaps = 28/187 (14%)
Query: 4 PHQ--SLYPQVHSTNPDANSPFFHASTSSS----MYPSV-----------------GNPT 40
P+Q SLYPQV +NPDA P + + SSS +YPSV G+P+
Sbjct: 6 PNQRNSLYPQVIDSNPDAPPPLLNPNRSSSSQPSLYPSVDYNDLVQNLFPEDATAAGSPS 65
Query: 41 TAQQPSEHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPL 100
+ +E L+ +PG IL+LI+KD SV LA GD ++I L +GD V V A V D++QWPL
Sbjct: 66 APLEATEEALLRIPGAILNLIDKDYSVELACGDFSVIRLRQGDNAVAVYARVADEIQWPL 125
Query: 101 AKDVSAVKLDDSHYFFTIRVPK--EGGEFE--VLNYGVTVAAEGR-GRGKELDEVLEKYC 155
AKD + VK+DDSHYFF+ RVPK + GE E +L+YG+T+A++G+ G KELD VLE
Sbjct: 126 AKDATTVKVDDSHYFFSFRVPKGSDPGEEEEDMLSYGLTIASKGQEGLLKELDVVLENCS 185
Query: 156 FLSVEKV 162
SV+ V
Sbjct: 186 CFSVQSV 192
>Glyma02g05230.1
Length = 461
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 116/204 (56%), Gaps = 49/204 (24%)
Query: 4 PHQ--SLYPQVHSTNPDANSPFFHASTSSSMYPSVG--------------NPTTAQQPSE 47
P+Q SLYPQV + P+A S ++ SSS+YP + +P+ +E
Sbjct: 6 PNQRNSLYPQVIESEPEACS----SNHSSSLYPKIDEVGDLVENLFPDNTSPSAPPVAAE 61
Query: 48 HVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAV 107
VL+ VPG ILHLI+KD SV LA G+L II L +G +V V A VGD++QWPLAKD +AV
Sbjct: 62 EVLIKVPGAILHLIDKDCSVELACGNLTIICLRQGQSLVAVYARVGDEIQWPLAKDEAAV 121
Query: 108 KLDDSHYFFTIRVPKE----------------------------GGEFEVLNYGVTVAAE 139
K+DDSHYFF++RVPKE VL+YG+T+A++
Sbjct: 122 KVDDSHYFFSLRVPKEESDSSSSDEEGEKAKHQNKKKKKNKKNKDSSASVLSYGLTIASK 181
Query: 140 GR-GRGKELDEVLEKYCFLSVEKV 162
G+ KELD+VL++ SV+KV
Sbjct: 182 GQEDLLKELDKVLQECSAFSVQKV 205
>Glyma06g17670.1
Length = 159
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 79/114 (69%), Gaps = 5/114 (4%)
Query: 44 QPSEHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKD 103
+ ++ L +P IL+LI+KD SV L G+ ++I L +GD VVT+ A V D++QWPL KD
Sbjct: 5 EATKEALFRIPSAILNLIDKDYSVELVCGNFSVIRLRQGDNVVTMYACVADEIQWPLTKD 64
Query: 104 VSAVKLDDSHYFFTIRVPK----EGGEFEVLNYGVTVAAEGR-GRGKELDEVLE 152
V+ VK+DDSHYFF+ VPK + E ++L+Y +T+A++G+ G KEL+ V E
Sbjct: 65 VTIVKVDDSHYFFSFHVPKGSDPDEEEEDMLSYDLTIASKGQEGLLKELNSVSE 118
>Glyma12g14390.1
Length = 152
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 77/115 (66%), Gaps = 11/115 (9%)
Query: 53 VPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAVKLDDS 112
+P VIL+LI+KD SV LA GD + GD VTV A V D++QW LAKD + +K++DS
Sbjct: 1 IPDVILNLIDKDYSVELACGDFS------GDNAVTVYARVADEIQWSLAKDATTMKVEDS 54
Query: 113 HYFFTIRVPK----EGGEFEVLNYGVTVAAEGR-GRGKELDEVLEKYCFLSVEKV 162
YFF+ RVPK + E ++L++G+T+A++G+ G KELD +LE S++ V
Sbjct: 55 RYFFSFRVPKGSDPDEEEEDMLSFGLTIASKGQEGLLKELDAILENCSCFSMQSV 109
>Glyma16g08490.1
Length = 399
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 43 QQPS---EHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWP 99
Q+P E V++ +PG +HL+++ ++ LA G I+ +ME + + + VG+ VQWP
Sbjct: 50 QKPKTLKEEVVLQIPGCKVHLMDQGEALELAQGHFTIMKIMEQNVALATIIKVGNSVQWP 109
Query: 100 LAKDVSAVKLDDSHYFFTIRVPKEGGEFEVLNYGVTVAAEGRGRGKELDEVLEKY-CFLS 158
L KD VK+D HY F++ V K+GG E L+YGVT + G + LD L+ + CF
Sbjct: 110 LTKDEPVVKVDALHYLFSLPV-KDGG--EPLSYGVTFPEQCYGNMEMLDSFLKDHSCFSG 166
Query: 159 VEK 161
+E+
Sbjct: 167 LER 169
>Glyma01g01150.1
Length = 377
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Query: 39 PTTAQQPSEHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQW 98
P T +Q V++ +PG +HL+++ ++ LA G I+ +M+ + + VG+ VQW
Sbjct: 30 PKTLKQ---EVVLQIPGCKVHLMDEGEAIELAQGHFTIMKIMDKNVPLATTIKVGNSVQW 86
Query: 99 PLAKDVSAVKLDDSHYFFTIRVPKEGGEFEVLNYGVTVAAEGRGRGKELDEVL-EKYCFL 157
PL KD VK+D HY F++ V K+GG E L+YGVT + G LD L ++ CF
Sbjct: 87 PLTKDEPVVKVDALHYLFSLPV-KDGG--EPLSYGVTFPEQCYGNMGMLDSFLKDQSCFS 143
Query: 158 SVEK 161
+E+
Sbjct: 144 GLER 147
>Glyma05g35850.1
Length = 374
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 47 EHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSA 106
+ VL+ +P +HL++ ++ LA G II E + + + VGD +QWPL KD
Sbjct: 33 QEVLIQIPACKVHLMDGGEALELAQGHFMIIKTFEENVSLATIIKVGDDLQWPLTKDEPV 92
Query: 107 VKLDDSHYFFTIRVPKEGGEFEVLNYGVTVAAEGRGRGKELDEVL-EKYCF 156
VKLD HY F++ V K+G E L+YGVT + G LD L ++ CF
Sbjct: 93 VKLDSLHYLFSLLV-KDG---EPLSYGVTFSEASLGSLSLLDMFLKDQSCF 139
>Glyma12g15240.1
Length = 134
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 21/115 (18%)
Query: 15 TNPDANSPFFHASTSSSMYPSV---------------------GNPTTAQQPSEHVLVTV 53
+N DA+ P + + SSS PSV +P + +E VL+ +
Sbjct: 3 SNSDASPPLLNPNRSSSSEPSVYPFVDYNDLIKNLFPEDVIAAKSPFVPPEATEEVLLWI 62
Query: 54 PGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSAVK 108
PGVIL+LI+KD +V LA D I GD+VV+V V D++QW LAKD + VK
Sbjct: 63 PGVILNLIDKDYNVDLACSDFFGILFWLGDKVVSVYMRVADEIQWLLAKDTTVVK 117
>Glyma08g03770.1
Length = 355
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 47 EHVLVTVPGVILHLIEKDSSVHLASGDLNIISLMEGDRVVTVLASVGDQVQWPLAKDVSA 106
+ VL+ +P +HL+++ ++ L+ G II E + + + VGD +QWPL KD+
Sbjct: 14 QEVLMQIPACKVHLMDEGEALELSQGHFMIIKTFEENVSLATIIKVGDDLQWPLTKDMPV 73
Query: 107 VKLDDSHYFFTIRVPKEGGEFEVLNYGVT 135
VKLD HY F++ V K G E L+YGVT
Sbjct: 74 VKLDSLHYLFSLLV-KNG---EPLSYGVT 98