Miyakogusa Predicted Gene

Lj0g3v0162439.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0162439.1 tr|I1MER5|I1MER5_SOYBN Ribosomal protein L34
OS=Glycine max PE=3 SV=1,64.17,5e-16,seg,NULL,CUFF.10298.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g30380.1                                                        66   1e-11
Glyma15g08820.1                                                        65   2e-11

>Glyma13g30380.1 
          Length = 146

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 1/47 (2%)

Query: 69  DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL SN GT  GK  GLVVRAGK  ALC TKR+RSRKSLARTHGFR+R
Sbjct: 70  DLTSNVGTRRGKGSGLVVRAGKA-ALCLTKRSRSRKSLARTHGFRKR 115


>Glyma15g08820.1 
          Length = 146

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/47 (76%), Positives = 38/47 (80%), Gaps = 1/47 (2%)

Query: 69  DLISNAGTGNGKRRGLVVRAGKKFALCQTKRNRSRKSLARTHGFRRR 115
           DL SN GT  GK  GLVVRAGK  ALC TKR+RSRKSLARTHGFR+R
Sbjct: 70  DLTSNFGTRRGKGSGLVVRAGKA-ALCLTKRSRSRKSLARTHGFRKR 115