Miyakogusa Predicted Gene

Lj0g3v0161589.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0161589.1 Non Chatacterized Hit- tr|I3ST46|I3ST46_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,84.21,9e-17,seg,NULL; SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT
SEC11,Peptidase S26B, eukaryotic signal peptida,CUFF.10032.1
         (61 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g06330.1                                                        63   7e-11
Glyma06g46690.1                                                        62   1e-10
Glyma06g46690.2                                                        48   3e-06

>Glyma17g06330.1 
          Length = 191

 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 39/57 (68%), Gaps = 3/57 (5%)

Query: 1  MNSVKSLQ---VLSQGVTLGMIVTSALIIWKALMCITGXXXXXXXXXXXXXXPGFKR 54
          ++S+KSLQ   VL+Q V+LGMIVTSALIIWKALMCITG              PGFKR
Sbjct: 19 VDSIKSLQIRQVLTQAVSLGMIVTSALIIWKALMCITGSESPVVVVLSGSMEPGFKR 75


>Glyma06g46690.1 
          Length = 180

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 39/57 (68%), Gaps = 3/57 (5%)

Query: 1  MNSVKSLQ---VLSQGVTLGMIVTSALIIWKALMCITGXXXXXXXXXXXXXXPGFKR 54
          ++S+KSLQ   VL+Q V+LGMIVTSALIIWKALMC+TG              PGFKR
Sbjct: 8  VDSIKSLQIRQVLTQAVSLGMIVTSALIIWKALMCVTGSESPVVVVLSGSMEPGFKR 64


>Glyma06g46690.2 
          Length = 164

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 24/38 (63%)

Query: 17 GMIVTSALIIWKALMCITGXXXXXXXXXXXXXXPGFKR 54
          GMIVTSALIIWKALMC+TG              PGFKR
Sbjct: 11 GMIVTSALIIWKALMCVTGSESPVVVVLSGSMEPGFKR 48