Miyakogusa Predicted Gene
- Lj0g3v0160979.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0160979.1 tr|B9NJL3|B9NJL3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_590257 PE=4
SV=1,53,3e-19,CYSTEINE SYNTHASE,NULL; SER/THR DEHYDRATASE, TRP
SYNTHASE,NULL; no description,NULL,gene.g12328.t1.1
(73 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g41600.1 117 3e-27
Glyma15g41600.2 117 3e-27
Glyma10g30140.5 112 6e-26
Glyma10g30140.4 112 6e-26
Glyma10g30140.3 112 6e-26
Glyma10g30140.2 112 6e-26
Glyma10g30140.1 112 6e-26
Glyma20g37280.3 112 6e-26
Glyma20g37280.1 112 6e-26
Glyma10g30130.1 112 9e-26
Glyma11g00810.3 98 3e-21
Glyma11g00810.2 98 3e-21
Glyma11g00810.1 98 3e-21
Glyma03g40490.1 96 7e-21
Glyma19g43150.1 95 2e-20
Glyma20g28630.1 90 5e-19
Glyma10g39320.1 89 1e-18
Glyma07g32790.1 82 1e-16
Glyma02g15640.1 82 1e-16
Glyma20g37280.2 73 6e-14
Glyma20g37290.1 65 1e-11
Glyma10g30130.3 64 3e-11
Glyma10g30130.2 64 3e-11
Glyma18g46920.1 63 6e-11
Glyma09g39390.1 63 7e-11
Glyma07g32790.2 60 4e-10
>Glyma15g41600.1
Length = 321
Score = 117 bits (293), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 69/100 (69%), Gaps = 27/100 (27%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL---------------- 44
+IQGIGAGI+PAVLDVNLLDEI+QVS+EEAIETA L LKEGLL
Sbjct: 222 LIQGIGAGIVPAVLDVNLLDEILQVSSEEAIETAKLLALKEGLLVGISSGAAAAAAIKLG 281
Query: 45 -----------VVFPSSGERYLSSPLFESIRHEAEQMTFD 73
VVFPSSGERYLSSPLFESIR EAEQMTFD
Sbjct: 282 KRPENADKLIVVVFPSSGERYLSSPLFESIRQEAEQMTFD 321
>Glyma15g41600.2
Length = 316
Score = 117 bits (293), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 69/100 (69%), Gaps = 27/100 (27%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL---------------- 44
+IQGIGAGI+PAVLDVNLLDEI+QVS+EEAIETA L LKEGLL
Sbjct: 217 LIQGIGAGIVPAVLDVNLLDEILQVSSEEAIETAKLLALKEGLLVGISSGAAAAAAIKLG 276
Query: 45 -----------VVFPSSGERYLSSPLFESIRHEAEQMTFD 73
VVFPSSGERYLSSPLFESIR EAEQMTFD
Sbjct: 277 KRPENADKLIVVVFPSSGERYLSSPLFESIRQEAEQMTFD 316
>Glyma10g30140.5
Length = 324
Score = 112 bits (281), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 67/100 (67%), Gaps = 27/100 (27%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL---------------- 44
+IQGIGAGIIP VLDVNLLDE+IQVS+EEAIETA L LKEGLL
Sbjct: 225 LIQGIGAGIIPKVLDVNLLDEVIQVSSEEAIETAKLLALKEGLLMGISSGAAAAAAIKVG 284
Query: 45 -----------VVFPSSGERYLSSPLFESIRHEAEQMTFD 73
V+FPS GERYLSSPLFESIR EAEQMTFD
Sbjct: 285 KRPENAGKLIVVIFPSFGERYLSSPLFESIRKEAEQMTFD 324
>Glyma10g30140.4
Length = 324
Score = 112 bits (281), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 67/100 (67%), Gaps = 27/100 (27%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL---------------- 44
+IQGIGAGIIP VLDVNLLDE+IQVS+EEAIETA L LKEGLL
Sbjct: 225 LIQGIGAGIIPKVLDVNLLDEVIQVSSEEAIETAKLLALKEGLLMGISSGAAAAAAIKVG 284
Query: 45 -----------VVFPSSGERYLSSPLFESIRHEAEQMTFD 73
V+FPS GERYLSSPLFESIR EAEQMTFD
Sbjct: 285 KRPENAGKLIVVIFPSFGERYLSSPLFESIRKEAEQMTFD 324
>Glyma10g30140.3
Length = 324
Score = 112 bits (281), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 67/100 (67%), Gaps = 27/100 (27%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL---------------- 44
+IQGIGAGIIP VLDVNLLDE+IQVS+EEAIETA L LKEGLL
Sbjct: 225 LIQGIGAGIIPKVLDVNLLDEVIQVSSEEAIETAKLLALKEGLLMGISSGAAAAAAIKVG 284
Query: 45 -----------VVFPSSGERYLSSPLFESIRHEAEQMTFD 73
V+FPS GERYLSSPLFESIR EAEQMTFD
Sbjct: 285 KRPENAGKLIVVIFPSFGERYLSSPLFESIRKEAEQMTFD 324
>Glyma10g30140.2
Length = 324
Score = 112 bits (281), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 67/100 (67%), Gaps = 27/100 (27%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL---------------- 44
+IQGIGAGIIP VLDVNLLDE+IQVS+EEAIETA L LKEGLL
Sbjct: 225 LIQGIGAGIIPKVLDVNLLDEVIQVSSEEAIETAKLLALKEGLLMGISSGAAAAAAIKVG 284
Query: 45 -----------VVFPSSGERYLSSPLFESIRHEAEQMTFD 73
V+FPS GERYLSSPLFESIR EAEQMTFD
Sbjct: 285 KRPENAGKLIVVIFPSFGERYLSSPLFESIRKEAEQMTFD 324
>Glyma10g30140.1
Length = 324
Score = 112 bits (281), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 67/100 (67%), Gaps = 27/100 (27%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL---------------- 44
+IQGIGAGIIP VLDVNLLDE+IQVS+EEAIETA L LKEGLL
Sbjct: 225 LIQGIGAGIIPKVLDVNLLDEVIQVSSEEAIETAKLLALKEGLLMGISSGAAAAAAIKVG 284
Query: 45 -----------VVFPSSGERYLSSPLFESIRHEAEQMTFD 73
V+FPS GERYLSSPLFESIR EAEQMTFD
Sbjct: 285 KRPENAGKLIVVIFPSFGERYLSSPLFESIRKEAEQMTFD 324
>Glyma20g37280.3
Length = 323
Score = 112 bits (281), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 67/100 (67%), Gaps = 27/100 (27%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL---------------- 44
+IQGIGAGIIP VLDVNLLDE+IQVS+EEAIETA L LKEGLL
Sbjct: 224 LIQGIGAGIIPKVLDVNLLDEVIQVSSEEAIETAKLLALKEGLLMGISSGAAAAAAIKVG 283
Query: 45 -----------VVFPSSGERYLSSPLFESIRHEAEQMTFD 73
V+FPS GERYLSSPLFESIR EAEQMTFD
Sbjct: 284 KRPENAGKLIVVIFPSFGERYLSSPLFESIRKEAEQMTFD 323
>Glyma20g37280.1
Length = 323
Score = 112 bits (281), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 67/100 (67%), Gaps = 27/100 (27%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL---------------- 44
+IQGIGAGIIP VLDVNLLDE+IQVS+EEAIETA L LKEGLL
Sbjct: 224 LIQGIGAGIIPKVLDVNLLDEVIQVSSEEAIETAKLLALKEGLLMGISSGAAAAAAIKVG 283
Query: 45 -----------VVFPSSGERYLSSPLFESIRHEAEQMTFD 73
V+FPS GERYLSSPLFESIR EAEQMTFD
Sbjct: 284 KRPENAGKLIVVIFPSFGERYLSSPLFESIRKEAEQMTFD 323
>Glyma10g30130.1
Length = 323
Score = 112 bits (280), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 67/100 (67%), Gaps = 27/100 (27%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL---------------- 44
+IQGIG G+IP+VLD NLLDE+IQ+S+EEAIETA L LKEGLL
Sbjct: 224 LIQGIGNGLIPSVLDFNLLDEVIQISSEEAIETAKLLALKEGLLMGISSGAAAAAAIKLG 283
Query: 45 -----------VVFPSSGERYLSSPLFESIRHEAEQMTFD 73
VVFPS GERYLSSPLFESIRHEAEQMTFD
Sbjct: 284 KRPENAGKLIVVVFPSYGERYLSSPLFESIRHEAEQMTFD 323
>Glyma11g00810.3
Length = 325
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 62/99 (62%), Gaps = 27/99 (27%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLLV---------------- 45
IQGIGAG IP VL+VNLLDE+IQ+S++EAIETA L LKEGL V
Sbjct: 226 IQGIGAGFIPGVLEVNLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAFQIAK 285
Query: 46 -----------VFPSSGERYLSSPLFESIRHEAEQMTFD 73
VFPS GERYLSS LFES+R EAE MTF+
Sbjct: 286 RPENAGKLIVAVFPSFGERYLSSVLFESVRREAESMTFE 324
>Glyma11g00810.2
Length = 325
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 62/99 (62%), Gaps = 27/99 (27%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLLV---------------- 45
IQGIGAG IP VL+VNLLDE+IQ+S++EAIETA L LKEGL V
Sbjct: 226 IQGIGAGFIPGVLEVNLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAFQIAK 285
Query: 46 -----------VFPSSGERYLSSPLFESIRHEAEQMTFD 73
VFPS GERYLSS LFES+R EAE MTF+
Sbjct: 286 RPENAGKLIVAVFPSFGERYLSSVLFESVRREAESMTFE 324
>Glyma11g00810.1
Length = 325
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 62/99 (62%), Gaps = 27/99 (27%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLLV---------------- 45
IQGIGAG IP VL+VNLLDE+IQ+S++EAIETA L LKEGL V
Sbjct: 226 IQGIGAGFIPGVLEVNLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAFQIAK 285
Query: 46 -----------VFPSSGERYLSSPLFESIRHEAEQMTFD 73
VFPS GERYLSS LFES+R EAE MTF+
Sbjct: 286 RPENAGKLIVAVFPSFGERYLSSVLFESVRREAESMTFE 324
>Glyma03g40490.1
Length = 325
Score = 96.3 bits (238), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 62/99 (62%), Gaps = 27/99 (27%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLLV---------------- 45
IQGIGAG IP VLDV+LLDE++Q+S+EEAIETA L LKEGLLV
Sbjct: 226 IQGIGAGFIPGVLDVDLLDEVVQISSEEAIETAKLLALKEGLLVGISSGAAAAAAIKIAK 285
Query: 46 -----------VFPSSGERYLSSPLFESIRHEAEQMTFD 73
VFPS GERYLSS LFES++ EAE M F+
Sbjct: 286 RPENAGKLIIAVFPSFGERYLSSVLFESVKREAESMVFE 324
>Glyma19g43150.1
Length = 325
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 62/99 (62%), Gaps = 27/99 (27%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLLV---------------- 45
IQGIGAG IP VLDV+LLDE++Q+S+EEAIETA L LKEGLLV
Sbjct: 226 IQGIGAGFIPGVLDVDLLDEVVQISSEEAIETAKLLALKEGLLVGISSGAAAAAAVKIAK 285
Query: 46 -----------VFPSSGERYLSSPLFESIRHEAEQMTFD 73
VFPS GERYLSS LFES++ EAE + F+
Sbjct: 286 RPENAGKLIVAVFPSFGERYLSSVLFESVKREAESLVFE 324
>Glyma20g28630.1
Length = 315
Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 63/99 (63%), Gaps = 27/99 (27%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGL------------------ 43
IQGIGAG +P VL+V+L+DE++Q+S++EAIETA L L+EGL
Sbjct: 216 IQGIGAGFVPGVLEVSLVDEVVQISSDEAIETAKLLALQEGLFVGISSGAAAAAAIKIAK 275
Query: 44 ---------LVVFPSSGERYLSSPLFESIRHEAEQMTFD 73
+V+FPS GERYLSS LFES+R EAE +TF+
Sbjct: 276 RPENAGKLIVVIFPSFGERYLSSVLFESVRREAESLTFE 314
>Glyma10g39320.1
Length = 286
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 62/99 (62%), Gaps = 27/99 (27%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGL------------------ 43
IQGIGAG +P VL+V+L+DE++Q+S++EAIETA L LKEGL
Sbjct: 187 IQGIGAGFVPGVLEVSLVDEVVQISSDEAIETAKLLALKEGLFVGISSGAAASAAIKIAK 246
Query: 44 ---------LVVFPSSGERYLSSPLFESIRHEAEQMTFD 73
+V+FPS GE YLSS LFESIR EAE +TF+
Sbjct: 247 RSENAGKLIVVIFPSFGEWYLSSVLFESIRQEAESLTFE 285
>Glyma07g32790.1
Length = 389
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 58/96 (60%), Gaps = 27/96 (28%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL----------------- 44
IQGIGAG +P LD ++LDE+I +S++EA+ETA QL L+EGLL
Sbjct: 290 IQGIGAGFVPRNLDQDVLDEVIAISSDEAVETAKQLALQEGLLVGISSGAAAAAALKVGK 349
Query: 45 ----------VVFPSSGERYLSSPLFESIRHEAEQM 70
VVFPS GERYLS+ LF+SIR E E+M
Sbjct: 350 RPENAGKLIGVVFPSFGERYLSTILFQSIREECEKM 385
>Glyma02g15640.1
Length = 394
Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 58/96 (60%), Gaps = 27/96 (28%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL----------------- 44
IQGIGAG +P LD ++LDE+I +S++EA+ETA QL L+EGLL
Sbjct: 295 IQGIGAGFVPRNLDQDVLDEVIAISSDEAVETAKQLALQEGLLVGISSGAAAAAALKVGK 354
Query: 45 ----------VVFPSSGERYLSSPLFESIRHEAEQM 70
VVFPS GERYLS+ LF+SIR E E+M
Sbjct: 355 RPENAGKLIGVVFPSFGERYLSTILFQSIREECEKM 390
>Glyma20g37280.2
Length = 313
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 40/44 (90%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLL 44
+IQGIGAGIIP VLDVNLLDE+IQVS+EEAIETA L LKEGLL
Sbjct: 224 LIQGIGAGIIPKVLDVNLLDEVIQVSSEEAIETAKLLALKEGLL 267
>Glyma20g37290.1
Length = 295
Score = 65.1 bits (157), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKE 41
IQGIG G+IP+VLDVNLLDE+IQ+S+EEAIETA L LKE
Sbjct: 225 IQGIGNGLIPSVLDVNLLDEVIQISSEEAIETARLLALKE 264
>Glyma10g30130.3
Length = 295
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKE 41
+IQGIG G+IP+VLD NLLDE+IQ+S+EEAIETA L LKE
Sbjct: 224 LIQGIGNGLIPSVLDFNLLDEVIQISSEEAIETAKLLALKE 264
>Glyma10g30130.2
Length = 295
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/41 (73%), Positives = 36/41 (87%)
Query: 1 MIQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKE 41
+IQGIG G+IP+VLD NLLDE+IQ+S+EEAIETA L LKE
Sbjct: 224 LIQGIGNGLIPSVLDFNLLDEVIQISSEEAIETAKLLALKE 264
>Glyma18g46920.1
Length = 372
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 27/96 (28%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLLV---------------- 45
I G G G P +LD+++++++++VS+E+A+ A L LKEGL+V
Sbjct: 271 ITGNGVGFKPDILDMDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRLAQ 330
Query: 46 -----------VFPSSGERYLSSPLFESIRHEAEQM 70
V PS GERYLSS LF+ +R EAE M
Sbjct: 331 LPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENM 366
>Glyma09g39390.1
Length = 373
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 27/96 (28%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLLV---------------- 45
I G G G P +LD+++++++++VS+E+A+ A L LKEGL+V
Sbjct: 272 ITGNGVGFKPDILDLDVMEKVLEVSSEDAVNMARVLALKEGLMVGISSGANTVAALRLAQ 331
Query: 46 -----------VFPSSGERYLSSPLFESIRHEAEQM 70
V PS GERYLSS LF+ +R EAE M
Sbjct: 332 LPENKGKLIVTVHPSFGERYLSSVLFQELRQEAENM 367
>Glyma07g32790.2
Length = 361
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 37/44 (84%)
Query: 2 IQGIGAGIIPAVLDVNLLDEIIQVSTEEAIETANQLGLKEGLLV 45
IQGIGAG +P LD ++LDE+I +S++EA+ETA QL L+EGLLV
Sbjct: 290 IQGIGAGFVPRNLDQDVLDEVIAISSDEAVETAKQLALQEGLLV 333