Miyakogusa Predicted Gene

Lj0g3v0160829.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0160829.1 Non Chatacterized Hit- tr|D7KQA7|D7KQA7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,63.89,4e-19,SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN,SSXT;
SSXT,SSXT; seg,NULL,gene.Ljchr0_pseudomol_20120828.path1.gene16206.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g40930.1                                                       135   2e-32
Glyma03g40930.2                                                       135   2e-32
Glyma19g43580.1                                                       133   8e-32
Glyma20g36960.1                                                       130   5e-31
Glyma10g30650.1                                                       127   4e-30
Glyma07g05720.4                                                        93   1e-19
Glyma07g05720.3                                                        93   1e-19
Glyma07g05720.2                                                        93   1e-19
Glyma07g05720.1                                                        93   1e-19
Glyma16g02310.5                                                        93   1e-19
Glyma16g02310.4                                                        93   1e-19
Glyma16g02310.3                                                        93   1e-19
Glyma16g02310.2                                                        93   1e-19
Glyma16g02310.1                                                        93   1e-19
Glyma07g05720.5                                                        84   4e-17
Glyma06g13940.1                                                        63   1e-10
Glyma09g14140.1                                                        53   1e-07
Glyma07g20980.1                                                        52   4e-07
Glyma14g28160.1                                                        49   2e-06

>Glyma03g40930.1 
          Length = 225

 Score =  135 bits (340), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/71 (91%), Positives = 69/71 (97%), Gaps = 1/71 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQ+RLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADS 71

Query: 73 QPQPPTMPGQW 83
          QPQPPTMPGQ+
Sbjct: 72 QPQPPTMPGQY 82


>Glyma03g40930.2 
          Length = 202

 Score =  135 bits (339), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/71 (91%), Positives = 69/71 (97%), Gaps = 1/71 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQ+RLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADS 71

Query: 73 QPQPPTMPGQW 83
          QPQPPTMPGQ+
Sbjct: 72 QPQPPTMPGQY 82


>Glyma19g43580.1 
          Length = 210

 Score =  133 bits (334), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 68/71 (95%), Gaps = 1/71 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQ+RLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADS 71

Query: 73 QPQPPTMPGQW 83
          QPQPPTM GQ+
Sbjct: 72 QPQPPTMSGQY 82


>Glyma20g36960.1 
          Length = 212

 Score =  130 bits (327), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 64/71 (90%), Positives = 67/71 (94%), Gaps = 1/71 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 71

Query: 73 QPQPPTMPGQW 83
          QPQP  MPGQ+
Sbjct: 72 QPQPSPMPGQY 82


>Glyma10g30650.1 
          Length = 212

 Score =  127 bits (319), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/71 (87%), Positives = 66/71 (92%), Gaps = 1/71 (1%)

Query: 13 ASYYTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 72
          A+YY NN VT+DHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS
Sbjct: 13 AAYYPNN-VTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADS 71

Query: 73 QPQPPTMPGQW 83
          QPQP  + GQ+
Sbjct: 72 QPQPSPLAGQY 82


>Glyma07g05720.4 
          Length = 213

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%)

Query: 20 NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPPTM 79
          N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+QPQ P M
Sbjct: 18 NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAM 77

Query: 80 PGQW 83
          P Q 
Sbjct: 78 PPQM 81


>Glyma07g05720.3 
          Length = 213

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%)

Query: 20 NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPPTM 79
          N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+QPQ P M
Sbjct: 18 NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAM 77

Query: 80 PGQW 83
          P Q 
Sbjct: 78 PPQM 81


>Glyma07g05720.2 
          Length = 213

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%)

Query: 20 NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPPTM 79
          N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+QPQ P M
Sbjct: 18 NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAM 77

Query: 80 PGQW 83
          P Q 
Sbjct: 78 PPQM 81


>Glyma07g05720.1 
          Length = 213

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%)

Query: 20 NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPPTM 79
          N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+QPQ P M
Sbjct: 18 NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAM 77

Query: 80 PGQW 83
          P Q 
Sbjct: 78 PPQM 81


>Glyma16g02310.5 
          Length = 181

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 56/68 (82%)

Query: 16 YTNNNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQ 75
          +   N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+QPQ
Sbjct: 14 FPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQ 73

Query: 76 PPTMPGQW 83
           P MP Q 
Sbjct: 74 TPAMPPQM 81


>Glyma16g02310.4 
          Length = 210

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%)

Query: 20 NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPPTM 79
          N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+QPQ P M
Sbjct: 18 NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAM 77

Query: 80 PGQW 83
          P Q 
Sbjct: 78 PPQM 81


>Glyma16g02310.3 
          Length = 210

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%)

Query: 20 NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPPTM 79
          N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+QPQ P M
Sbjct: 18 NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAM 77

Query: 80 PGQW 83
          P Q 
Sbjct: 78 PPQM 81


>Glyma16g02310.2 
          Length = 210

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%)

Query: 20 NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPPTM 79
          N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+QPQ P M
Sbjct: 18 NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAM 77

Query: 80 PGQW 83
          P Q 
Sbjct: 78 PPQM 81


>Glyma16g02310.1 
          Length = 210

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 55/64 (85%)

Query: 20 NVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPPTM 79
          N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+QPQ P M
Sbjct: 18 NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAM 77

Query: 80 PGQW 83
          P Q 
Sbjct: 78 PPQM 81


>Glyma07g05720.5 
          Length = 190

 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/58 (67%), Positives = 49/58 (84%)

Query: 26 IQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQPPTMPGQW 83
          + QYLDENK LIL I+++QN GKL+ECA+ Q++LQ+NLMYLAAIAD+QPQ P MP Q 
Sbjct: 1  MMQYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAMPPQM 58


>Glyma06g13940.1 
          Length = 195

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 42/55 (76%)

Query: 21 VTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQSRLQRNLMYLAAIADSQPQ 75
          +T++ IQ+YL+ENK LIL I+E QN GK +E A+ Q++LQ NL +LA +AD+  Q
Sbjct: 14 LTTEQIQKYLEENKELILAILEHQNMGKFTEIAQCQAKLQHNLTFLAKLADAGSQ 68


>Glyma09g14140.1 
          Length = 109

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 25/28 (89%)

Query: 55 NQSRLQRNLMYLAAIADSQPQPPTMPGQ 82
          NQSRLQRNLMYLAAIADSQPQP  + GQ
Sbjct: 1  NQSRLQRNLMYLAAIADSQPQPSPLAGQ 28


>Glyma07g20980.1 
          Length = 120

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 25/28 (89%)

Query: 55 NQSRLQRNLMYLAAIADSQPQPPTMPGQ 82
          NQSRLQRNLMYL+AIADSQPQP  + GQ
Sbjct: 1  NQSRLQRNLMYLSAIADSQPQPSPLDGQ 28


>Glyma14g28160.1 
          Length = 172

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/26 (84%), Positives = 23/26 (88%)

Query: 57 SRLQRNLMYLAAIADSQPQPPTMPGQ 82
          SRLQRNLMYLAAIADSQPQP  + GQ
Sbjct: 55 SRLQRNLMYLAAIADSQPQPSPLAGQ 80