Miyakogusa Predicted Gene

Lj0g3v0159729.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0159729.1 tr|B9HRR7|B9HRR7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_804223 PE=4
SV=1,82.86,0.00000001,DUF677,Protein of unknown function
DUF677,CUFF.9903.1
         (35 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g20530.1                                                        61   3e-10
Glyma11g12820.1                                                        57   3e-09
Glyma12g04970.1                                                        57   4e-09

>Glyma07g20530.1 
          Length = 371

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/34 (82%), Positives = 31/34 (91%)

Query: 1   MKNVEDLGVQAGTCSRDIRRAKTVVLQKILKLPQ 34
           MKNVEDLG+QA TCSRDI RA+TVVLQKI+KLP 
Sbjct: 337 MKNVEDLGLQADTCSRDIIRARTVVLQKIIKLPH 370


>Glyma11g12820.1 
          Length = 374

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 30/35 (85%)

Query: 1   MKNVEDLGVQAGTCSRDIRRAKTVVLQKILKLPQN 35
           MKNVEDL VQA  CSRDIRRA+TVVLQ+I+K P N
Sbjct: 340 MKNVEDLAVQADMCSRDIRRARTVVLQRIIKHPHN 374


>Glyma12g04970.1 
          Length = 373

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/35 (77%), Positives = 30/35 (85%)

Query: 1   MKNVEDLGVQAGTCSRDIRRAKTVVLQKILKLPQN 35
           MKNVEDL VQA  CSRDIRRA+TVVLQ+I+K P N
Sbjct: 339 MKNVEDLAVQADMCSRDIRRARTVVLQRIIKHPHN 373