Miyakogusa Predicted Gene

Lj0g3v0159279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0159279.1 Non Chatacterized Hit- tr|I1IVM8|I1IVM8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,46.03,6e-19,seg,NULL,CUFF.9866.1
         (190 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g28130.1                                                       173   8e-44
Glyma03g19740.1                                                       172   3e-43
Glyma20g11020.1                                                       110   6e-25
Glyma18g28130.2                                                       108   3e-24

>Glyma18g28130.1 
          Length = 593

 Score =  173 bits (439), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 97/121 (80%), Positives = 102/121 (84%), Gaps = 1/121 (0%)

Query: 70  LPKVTTLPPDISHGDKSESSPSNFKLEKSKTERHRHLRPGDAAQIFNDKIPVQEKLKLLN 129
           L KVTTLP DIS      SS S FK+E+SKTER RHL P DAAQIF+DKIP+QEKLKLLN
Sbjct: 42  LSKVTTLPADISQDKSESSS-SKFKMERSKTERQRHLSPEDAAQIFDDKIPIQEKLKLLN 100

Query: 130 RIATVKDDGTVEFEVPGDVEPEAFGARSKHVNNVVDGSLDATDLHYIPPLNIVMLIVGTR 189
           RIATVKDDGTVEFEVP DVEPEA  ARSK VN+VVD SLDATD HYIPPLNIVMLIVGTR
Sbjct: 101 RIATVKDDGTVEFEVPVDVEPEAIFARSKQVNHVVDDSLDATDFHYIPPLNIVMLIVGTR 160

Query: 190 G 190
           G
Sbjct: 161 G 161


>Glyma03g19740.1 
          Length = 193

 Score =  172 bits (435), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/121 (76%), Positives = 100/121 (82%), Gaps = 1/121 (0%)

Query: 70  LPKVTTLPPDISHGDKSESSPSNFKLEKSKTERHRHLRPGDAAQIFNDKIPVQEKLKLLN 129
           L KVTTLP DIS      SS    K+E+SKTER RHL P DAAQIF+DK+P+QEKLKLLN
Sbjct: 6   LSKVTTLPADISQDKSESSSSKF-KMERSKTERQRHLSPEDAAQIFDDKVPIQEKLKLLN 64

Query: 130 RIATVKDDGTVEFEVPGDVEPEAFGARSKHVNNVVDGSLDATDLHYIPPLNIVMLIVGTR 189
           RIAT+KDDGTVEFEVP DVEPEA  ARSK VN+VVD SLDATD HYIPPLNIVMLIVGTR
Sbjct: 65  RIATIKDDGTVEFEVPVDVEPEANFARSKQVNHVVDDSLDATDFHYIPPLNIVMLIVGTR 124

Query: 190 G 190
           G
Sbjct: 125 G 125


>Glyma20g11020.1 
          Length = 145

 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/72 (77%), Positives = 59/72 (81%)

Query: 119 IPVQEKLKLLNRIATVKDDGTVEFEVPGDVEPEAFGARSKHVNNVVDGSLDATDLHYIPP 178
           I V   LKLLN IAT+KDDGTVEFEVP DVEPEA  ARSK +N+VVD SLD TD HYIPP
Sbjct: 28  IFVVALLKLLNIIATIKDDGTVEFEVPVDVEPEAIFARSKQLNHVVDDSLDETDFHYIPP 87

Query: 179 LNIVMLIVGTRG 190
           LN VMLIVGTRG
Sbjct: 88  LNKVMLIVGTRG 99


>Glyma18g28130.2 
          Length = 507

 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 55/61 (90%)

Query: 130 RIATVKDDGTVEFEVPGDVEPEAFGARSKHVNNVVDGSLDATDLHYIPPLNIVMLIVGTR 189
           RIATVKDDGTVEFEVP DVEPEA  ARSK VN+VVD SLDATD HYIPPLNIVMLIVGTR
Sbjct: 15  RIATVKDDGTVEFEVPVDVEPEAIFARSKQVNHVVDDSLDATDFHYIPPLNIVMLIVGTR 74

Query: 190 G 190
           G
Sbjct: 75  G 75