Miyakogusa Predicted Gene

Lj0g3v0158389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0158389.1 Non Chatacterized Hit- tr|B9RJV9|B9RJV9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,43.56,3e-17,seg,NULL,21380_g.1
         (197 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g09730.1                                                       165   4e-41
Glyma06g09820.1                                                       160   9e-40
Glyma04g09730.2                                                       115   4e-26
Glyma02g37670.1                                                       101   5e-22
Glyma14g35960.1                                                        86   2e-17

>Glyma04g09730.1 
          Length = 1039

 Score =  165 bits (417), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/198 (50%), Positives = 115/198 (58%), Gaps = 21/198 (10%)

Query: 1    MSSSISPDGSPALESFYSKFHQLKGILQEXXXXXXXXXXXXXXXXXXCSTESRRDSTSID 60
            ++SSISPD SPAL+SFYSKFH LK IL+E                  CST+S RDSTS D
Sbjct: 852  VNSSISPDDSPALDSFYSKFHHLKRILEEDSSSDNSSLISSNSDEGSCSTDSTRDSTSTD 911

Query: 61   DFSDYIFGDSGRGWSSLWRN-XXXXXXXXXXXPLNFRHSPLSDMDRYDSVSPVATGLRIP 119
            DFS+Y+FGDSG GWSS+WRN            PLN RHSPLSDMDRYDSVSP A G    
Sbjct: 912  DFSEYLFGDSGNGWSSVWRNSDSDTSSSSSSSPLNLRHSPLSDMDRYDSVSPDAEG---- 967

Query: 120  TGSSSEIDGPSHRSREMDVERKGVGDSSLHRKLDSGRVXXXXXXXXXRETDSFLKLRTDH 179
                         SR +DV R     +  HRKLDS            RETDS LKL ++H
Sbjct: 968  -------------SRGIDVSRLSSNTTLQHRKLDS---RISSNSSSSRETDSCLKLGSNH 1011

Query: 180  FNDVNTNLSCRKSRKRTD 197
            FND++  + CRK RKRTD
Sbjct: 1012 FNDIDYGVLCRKPRKRTD 1029


>Glyma06g09820.1 
          Length = 1009

 Score =  160 bits (404), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 96/197 (48%), Positives = 114/197 (57%), Gaps = 21/197 (10%)

Query: 2    SSSISPDGSPALESFYSKFHQLKGILQEXXXXXXXXXXXXXXXXXXCSTESRRDSTSIDD 61
            +SSIS D SPAL SFYSKFH LK IL+E                  CST+S RDST+ DD
Sbjct: 833  NSSISSDDSPALASFYSKFHHLKRILEEDSSSDNSSLISSNSDEGSCSTDSTRDSTNTDD 892

Query: 62   FSDYIFGDSGRGWSSLWRN-XXXXXXXXXXXPLNFRHSPLSDMDRYDSVSPVATGLRIPT 120
            FS+Y+FGDSG GWSS+WRN            PLN+ HSPLSD+DRYDSVSPVA GL    
Sbjct: 893  FSEYLFGDSGNGWSSVWRNSDSDTSSSSSSSPLNWGHSPLSDVDRYDSVSPVAAGL---- 948

Query: 121  GSSSEIDGPSHRSREMDVERKGVGDSSLHRKLDSGRVXXXXXXXXXRETDSFLKLRTDHF 180
                         R +DV R     +  HRKLDS            RETDSF+KL ++HF
Sbjct: 949  -------------RGIDVSRLSFNTTLQHRKLDS---SRINSNSSSRETDSFMKLGSNHF 992

Query: 181  NDVNTNLSCRKSRKRTD 197
            ND+++ + CRK  KRTD
Sbjct: 993  NDIDSGVLCRKPGKRTD 1009


>Glyma04g09730.2 
          Length = 964

 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 68/105 (64%), Gaps = 1/105 (0%)

Query: 1   MSSSISPDGSPALESFYSKFHQLKGILQEXXXXXXXXXXXXXXXXXXCSTESRRDSTSID 60
           ++SSISPD SPAL+SFYSKFH LK IL+E                  CST+S RDSTS D
Sbjct: 852 VNSSISPDDSPALDSFYSKFHHLKRILEEDSSSDNSSLISSNSDEGSCSTDSTRDSTSTD 911

Query: 61  DFSDYIFGDSGRGWSSLWRN-XXXXXXXXXXXPLNFRHSPLSDMD 104
           DFS+Y+FGDSG GWSS+WRN            PLN RHSPLSDMD
Sbjct: 912 DFSEYLFGDSGNGWSSVWRNSDSDTSSSSSSSPLNLRHSPLSDMD 956


>Glyma02g37670.1 
          Length = 981

 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 103/203 (50%), Gaps = 30/203 (14%)

Query: 6   SPDGSPALESFYSKFHQLKGILQEXXXXXXXXXXXXXXXXXXCSTESRRDSTSIDDFSDY 65
           SP GS +L++ YSKF   K IL+E                  CST+S  DSTS DDF+DY
Sbjct: 798 SPGGSASLDTLYSKFLHSKRILEEDSSSDNSSLISSNSDEGSCSTDSTADSTSTDDFADY 857

Query: 66  IFGDSGRGWSSLWRNXXXXXXXXXXXPLNFRHS---PLSDMDRYDSVS-PVATGLRIPTG 121
           IFGD GRG   + RN             +F HS   P SD+D++DSV  P +TG + P+ 
Sbjct: 858 IFGDVGRGAGGMLRNSDSNICPALP---SFPHSGYFPSSDIDQHDSVVLPHSTGFQ-PSP 913

Query: 122 SSSEIDGPSHRSREMDVERKGVGDSSL-------HRKLDSGRVXXXXXXXXXRETDSFLK 174
           S    +G  +R+R +DV+R G G S         HRKLD+            RETDS   
Sbjct: 914 SE---EGLLYRNRVVDVKRSGGGVSHFHLDTNIEHRKLDT-----SSSSISFRETDSV-- 963

Query: 175 LRTDHFNDVNTNLSCRKSRKRTD 197
                FND N+ +SC KSR RTD
Sbjct: 964 -----FNDRNSGVSCTKSRYRTD 981


>Glyma14g35960.1 
          Length = 986

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 103/199 (51%), Gaps = 14/199 (7%)

Query: 6   SPDGSPALESFYSKFHQLKGILQEXXXXXXXXXXXXXXXXXXCSTESRRDSTSIDDFSDY 65
           SPDGSP+L++ Y KF   K IL++                  CST+S  DST  DDF+DY
Sbjct: 795 SPDGSPSLDTLYLKFLHPKMILEDDSSSDNSSLISSNSDEGSCSTDSTSDSTGTDDFADY 854

Query: 66  IFGDSGRGWSSLWRNXXXXXXXXXXXPLNFRHSPLSDMDRYDSVSPVATGLRIPTGSSSE 125
           IF D+GRG   + RN             + R+ P SD+D    V P +TG + P+ S   
Sbjct: 855 IFSDAGRGAGGILRNSDSSISPALSSSPHSRYFPSSDIDHDSVVLPHSTGFQ-PSPS--- 910

Query: 126 IDGPSHRSREMDVERKGVG------DSSL-HRKLDSGRVXXXXXXXXXRETDSFLKLRTD 178
            DG  +R+R +DV+R G G      D+++ HRKLD+            R+TDS  +  ++
Sbjct: 911 -DGLLYRNRVVDVKRSGGGVFHFHPDTNIEHRKLDT--TTSRSNCSSFRDTDSVQRAGSN 967

Query: 179 HFNDVNTNLSCRKSRKRTD 197
           HFND N+ +S   SR RTD
Sbjct: 968 HFNDRNSGVSYTNSRDRTD 986