Miyakogusa Predicted Gene

Lj0g3v0158289.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0158289.1 Non Chatacterized Hit- tr|I1JUC2|I1JUC2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6226
PE=,53.85,0.00000000002,seg,NULL,
NODE_18479_length_243_cov_296.135803.path1.1
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g07140.1                                                        69   1e-12
Glyma04g07050.1                                                        65   2e-11

>Glyma06g07140.1 
          Length = 641

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/52 (63%), Positives = 40/52 (76%), Gaps = 2/52 (3%)

Query: 40  NFRSPPYEYESGGFRGESGYGNNGMRRTRSFGDMTETAGREDNNKKV-VTPL 90
           NF+SPPYEY  G FRGE  YG NGMR+TRS+GDM+E+ GR +  + V VTPL
Sbjct: 177 NFQSPPYEYGGGEFRGEGAYG-NGMRKTRSYGDMSESVGRGEEKRVVSVTPL 227


>Glyma04g07050.1 
          Length = 652

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 51/91 (56%), Gaps = 7/91 (7%)

Query: 1   MMLFDRKXXXXXXXXXXXXXXXXXXXXXXXXDDRFGGRDNFRSPPYEYESGGFRGESGYG 60
           +MLFDRK                        DDRFGGRDNF+SPPYEY  GG     G  
Sbjct: 152 LMLFDRKSTAASYGGGAGSVGGGGS------DDRFGGRDNFQSPPYEYGGGGEFRGEGGY 205

Query: 61  NNGMRRTRSFGDMTETAGREDNNKKV-VTPL 90
            NGMR+TRS+GDM+E+ GR +  + V VTPL
Sbjct: 206 GNGMRKTRSYGDMSESVGRGEEKRVVSVTPL 236