Miyakogusa Predicted Gene

Lj0g3v0157819.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0157819.1 Non Chatacterized Hit- tr|I1KJV5|I1KJV5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22422 PE,72.13,8e-16,
,CUFF.9748.1
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g15500.1                                                        88   2e-18
Glyma01g00590.1                                                        70   6e-13

>Glyma07g15500.1 
          Length = 301

 Score = 87.8 bits (216), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/63 (69%), Positives = 48/63 (76%), Gaps = 8/63 (12%)

Query: 1   MLLGFGAASFLSQSMNMSGDVGGKSFIASARITGGPSVDEILKNVEWPEQFPFKEEDFQR 60
           MLLG G  SFLS +       G KSFIA ARIT GPSVDEILKNVEWP+QFPFKEEDFQR
Sbjct: 48  MLLGLGV-SFLSMA-------GSKSFIALARITAGPSVDEILKNVEWPDQFPFKEEDFQR 99

Query: 61  YHD 63
           + +
Sbjct: 100 FDE 102


>Glyma01g00590.1 
          Length = 258

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 35/38 (92%)

Query: 26 FIASARITGGPSVDEILKNVEWPEQFPFKEEDFQRYHD 63
           +ASA+I GGPSVDEILKNVEWPEQFPFKEE+FQR+ +
Sbjct: 22 LLASAKIKGGPSVDEILKNVEWPEQFPFKEEEFQRFDE 59