Miyakogusa Predicted Gene

Lj0g3v0157099.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0157099.1 tr|G7KHA8|G7KHA8_MEDTR Cc-nbs-lrr resistance
protein OS=Medicago truncatula GN=MTR_5g085400 PE=4
SV=,47.79,9e-18,seg,NULL,AV776911.path1.1
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g38500.1                                                        56   9e-09
Glyma11g17880.1                                                        48   2e-06

>Glyma14g38500.1 
          Length = 945

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 13/112 (11%)

Query: 24  KLKRLIVKWCGQLESLFPVSFSKGLVQLEYLEIDKAPELKYIF----------YQNQLSC 73
           KL  L ++ C  LE +FP+  + GL  LE L+I++  ELKY+F          YQ+Q   
Sbjct: 811 KLGTLTIRRCQGLEYIFPMCCAHGLASLEELDIEECNELKYVFGNEKEHDLRVYQHQSHR 870

Query: 74  QNQNELHIIEFPVXXXXXXXXXPNIINICPENYHPMWPSLQNLYLLQCPHLN 125
           Q + +++++             PN++ I P+  HP  P+L+ L    CP L+
Sbjct: 871 QTKVDINLLYLG---ELHLKSLPNLVEIWPKYCHPRLPNLEKLICQNCPRLS 919


>Glyma11g17880.1 
          Length = 898

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 54  LEIDKAPELKYIFYQ----NQLSCQNQNELHIIEFPVXXXXXXXXXPNIINICPENYHPM 109
           LEI    ELKY+F      + L+ QNQNEL I E            P II+ICPE  +P 
Sbjct: 756 LEIVSNSELKYLFGHCTKGDHLAGQNQNELKI-ELTALEELTLIMLPEIISICPEVCYPT 814

Query: 110 WPSLQNLYLLQCPHLNI 126
           WP L+   L    +L +
Sbjct: 815 WPLLRQFTLQNSSYLTV 831