Miyakogusa Predicted Gene

Lj0g3v0156239.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0156239.1 tr|F4ITP5|F4ITP5_ARATH TraB family protein
OS=Arabidopsis thaliana GN=At2g32340 PE=4 SV=1,40.71,2e-19,
,gene.Ljchr0_pseudomol_20120828.path1.gene15742.1
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g45890.1                                                       121   2e-28
Glyma12g10880.1                                                       119   1e-27

>Glyma06g45890.1 
          Length = 333

 Score =  121 bits (303), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/124 (54%), Positives = 74/124 (59%), Gaps = 33/124 (26%)

Query: 2   LPVELSRNVLFLSCESSAEGGVCDVYVLGTCHVSE----------------AVFLELCWR 45
           LP ELSRNV  LSCESSAEGGVCDVY++GT HVSE                 VFLELC  
Sbjct: 60  LPPELSRNVRVLSCESSAEGGVCDVYLVGTAHVSEESSREVQAIVNFLKPQVVFLELCSS 119

Query: 46  RRGALTRKTLK-----------------IGSELGVIPGSEFRVAYEEANKYGGRVALGDR 88
           R   LT + LK                 I S+L V PGSEFRVAYEEA KYGGRV LGDR
Sbjct: 120 RVAVLTLQNLKVPTMGEMYFMAGSLPRQIASKLEVFPGSEFRVAYEEAIKYGGRVILGDR 179

Query: 89  PIQV 92
           P+Q+
Sbjct: 180 PVQI 183


>Glyma12g10880.1 
          Length = 394

 Score =  119 bits (297), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 67/126 (53%), Positives = 74/126 (58%), Gaps = 35/126 (27%)

Query: 2   LPVELSRNVLFLSCESSAEGGVCDVYVLGTCHVSE----------------AVFLELCWR 45
           L  ELSRNVL LSCES+AEGGVCDVY++GT HVSE                 VFLELC  
Sbjct: 119 LSPELSRNVLVLSCESAAEGGVCDVYLVGTAHVSEESSREVQAIVNFLKPQVVFLELCSS 178

Query: 46  RRGALTRKTLK-------------------IGSELGVIPGSEFRVAYEEANKYGGRVALG 86
           R   LT + LK                   I S+L V PGSEFRVAYEEA KYGGRV LG
Sbjct: 179 RVAVLTLQNLKVPTMGEMVTMLKKKHNMFEIASKLEVFPGSEFRVAYEEAIKYGGRVILG 238

Query: 87  DRPIQV 92
           DRP+Q+
Sbjct: 239 DRPVQI 244