Miyakogusa Predicted Gene

Lj0g3v0155879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0155879.1 Non Chatacterized Hit- tr|I1JZC3|I1JZC3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48587 PE,90.15,0,no
description,ATPase-like, ATP-binding domain; no description,Ribosomal
protein S5 domain 2-type fo,gene.g11938.t1.1
         (315 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g43420.1                                                       506   e-143
Glyma02g17420.1                                                       133   2e-31
Glyma01g36280.1                                                        99   7e-21
Glyma11g09160.1                                                        89   8e-18

>Glyma04g43420.1 
          Length = 744

 Score =  506 bits (1302), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 240/264 (90%), Positives = 256/264 (96%)

Query: 1   MEPPKIQRLSESVVNRIAAGEVIQRPVSAVKELLENSLDAGSTSINLLIKDGGLKLIQVS 60
           MEPPKIQRLSESVVNRIAAGEVIQRPVSAVKEL+ENSLDA S+S++LLIKDGGLKLIQVS
Sbjct: 10  MEPPKIQRLSESVVNRIAAGEVIQRPVSAVKELVENSLDAASSSVSLLIKDGGLKLIQVS 69

Query: 61  DDGHGVRFEDLPILCERHTTSKLSAFEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGK 120
           DDGHG+RFEDLPILCERHTTSKLS+FEDLQ IKSMGFRGEALASMTYV HVTVTTITK +
Sbjct: 70  DDGHGIRFEDLPILCERHTTSKLSSFEDLQRIKSMGFRGEALASMTYVAHVTVTTITKPQ 129

Query: 121 LHGYRVSYRDGVMEHEPKPCAAVKGTQIMVENLFYNMAARRKTLQSSSDDYSKIVDLVSR 180
           LHGYRVSYRDGVMEH+P+PCAAVKGTQIMVENLFYNMAARRKTLQ+SSDDYSKIVDLVSR
Sbjct: 130 LHGYRVSYRDGVMEHQPRPCAAVKGTQIMVENLFYNMAARRKTLQNSSDDYSKIVDLVSR 189

Query: 181 FAIHHTNVGFSCRKHGAVKADVHTVSTSSRLDAIRSVYGVSVARNLVEIEASDNDPSTSC 240
           FAIHH NV FSCRKHGAV+ADVHTV+ SSRLDAI+SVYGVSVARNL+EIEASDNDPSTS 
Sbjct: 190 FAIHHINVSFSCRKHGAVRADVHTVAMSSRLDAIKSVYGVSVARNLIEIEASDNDPSTSV 249

Query: 241 FEMHGYISNANHAAKKITMVLFIN 264
           FEMHGY+SNAN+AAKKITMVLFIN
Sbjct: 250 FEMHGYMSNANYAAKKITMVLFIN 273


>Glyma02g17420.1 
          Length = 938

 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 154/273 (56%), Gaps = 13/273 (4%)

Query: 6   IQRLSESVVNRIAAGEVIQRPVSAVKELLENSLDAGSTSINLLIKDGGLKLIQVSDDGHG 65
           I+ + + +V+RI AG+VI    SAVKEL+ENSLDAG+TSI + +KD G +  QV D+G G
Sbjct: 8   IKPIGKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEQWFQVIDNGCG 67

Query: 66  VRFEDLPILCERHTTSKLSAFEDLQSIKSMGFRGEALASMTYVGHVTVTTITKGKLHGYR 125
           +   +  +L  +H TSKLS F DLQS+ + GFRGEAL+S+  +G++TV T T  +     
Sbjct: 68  ISPNNFKVLALKHHTSKLSEFHDLQSLTTFGFRGEALSSLCALGNLTVETRTASEPVATH 127

Query: 126 VSYRD-GVMEHEPKPCAAVKGTQIMVENLFYNMAARRKTLQSS-SDDYSKIVDLVSRFAI 183
           +++ + GV+  E K    + GT +MV+ LF N+  R K    +   +Y K+V L++ +A+
Sbjct: 128 LTFDNSGVLVAERKTARQI-GTTVMVKKLFSNLPVRSKEFSRNIRREYGKLVSLLNAYAL 186

Query: 184 HHTNVGFSCRKHGA--VKADV-HTVSTSSRLDAIRSVYGVSVARNLVEIEASDNDPSTSC 240
               V F C       V++ V  T  + S  D + +V G++    L  +  S +D   SC
Sbjct: 187 IAKGVRFVCTNTTGKNVRSVVLKTQGSGSLKDNVITVLGMNTFSCLEPVTLSISD---SC 243

Query: 241 FEMHGYISNANHAAKK---ITMVLFINGINVNL 270
            ++ G++S +     +        F+NG  V++
Sbjct: 244 -KVEGFLSKSGQGNGRNLGDRQYFFVNGRPVDM 275


>Glyma01g36280.1 
          Length = 1006

 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 14/237 (5%)

Query: 6   IQRLSESVVNRIAAGEVIQRPVSAVKELLENSLDAGSTSINLLIKDGGLKLIQVSDDGHG 65
           I+ L E+V + + +G  +      V+EL+ NSLDA +T +++ +      L +V DDG G
Sbjct: 4   IKPLPEAVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVSTRSCYL-KVVDDGSG 62

Query: 66  VRFEDLPILCERHTTSKLSAFEDLQSI-KSMGFRGEALASMTYVGHVTVTTITKGKLHGY 124
           +  ++L ++ ER+ TSK     DL +  ++ GFRGEALAS++ V  + + T T G+ +GY
Sbjct: 63  IPRDELELVGERYATSKFLNLVDLNATSENFGFRGEALASISEVSLLEIVTKTYGRPNGY 122

Query: 125 RVSYRD------GVMEHEPKPCAAVKGTQIMVENLFYNMAARRKTLQSSSDD-YSKIVDL 177
           R   +       G+ +   +      GT ++V +LFYN   RRK +QSS +     I + 
Sbjct: 123 RKVLKGCKCLYLGIDDDRKE-----VGTTVVVRDLFYNQPVRRKYMQSSPNKVLQSIKNC 177

Query: 178 VSRFAIHHTNVGFSCRKHGAVKADVHTVSTSSRLDAIRSVYGVSVARNLVEIEASDN 234
           + R A+   N+ F             T S SS L  + S +GV VA +L  +E  ++
Sbjct: 178 IMRLALVRPNISFKVVDIEREDELFCTHSASSPLPLVTSGFGVEVASSLHNLEVEND 234


>Glyma11g09160.1 
          Length = 895

 Score = 88.6 bits (218), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 128/258 (49%), Gaps = 26/258 (10%)

Query: 6   IQRLSESVVNRIAAGEVIQRPVSAVKELLENSLDAGSTS-------INLLIKDGGLKLIQ 58
           I+ LSE+V + + +G  +      V+EL+ NSLDA +T        +++ +  G   L +
Sbjct: 4   IKLLSEAVRSSLRSGIFLVDFTRVVEELVFNSLDARATKGETEKLKVSVFVSTGSCYL-K 62

Query: 59  VSDDGHGVRFEDLPILCERHTTSKLSAFEDLQ-SIKSMGFRGEALASMTYVGHVTVTTIT 117
           V DDG G+  + + ++ ER+ TSK     DL  S ++ GFRGE LAS++ V  + + T T
Sbjct: 63  VVDDGSGIPRDGMEMVGERYATSKFLNLVDLNASSENFGFRGEVLASISEVSLLEIVTKT 122

Query: 118 KGKLHGYRVSYRD------GVMEHEPKPCAAVKGTQIMVENLFYNMAARRKTLQSSSDD- 170
            G+ +GYR   +       G+ +   +      GT +++ +LFYN   +RK +QSS +  
Sbjct: 123 YGRPNGYRKVLKGCKCLYLGIDDDRKE-----MGTTVVIRDLFYNQPVQRKYMQSSPNKV 177

Query: 171 YSKIVDLVSRFAIHHTNVGFSCRKHGAVKADVHTVSTSSRLDAIRSVYGVSVARNLVEIE 230
              I + V   A+   N+ F             T S SS L  + S +GV V  +L  +E
Sbjct: 178 LQSIKNCVVWLALVCPNISFKVVDIEREDELFCTHSASSPLSLVTSGFGVEVTSSLHNLE 237

Query: 231 ASDNDPSTSCFEMHGYIS 248
             +ND      ++ GYIS
Sbjct: 238 V-END----IIKLSGYIS 250