Miyakogusa Predicted Gene

Lj0g3v0155229.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0155229.1 Non Chatacterized Hit- tr|I3J7C6|I3J7C6_ORENI
Uncharacterized protein OS=Oreochromis niloticus
GN=WD,26.15,4e-18,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; seg,NULL; WD40
repeats,WD,CUFF.9645.1
         (389 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g29250.1                                                       515   e-146
Glyma08g12410.1                                                       469   e-132

>Glyma05g29250.1 
          Length = 384

 Score =  515 bits (1327), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 281/393 (71%), Positives = 314/393 (79%), Gaps = 13/393 (3%)

Query: 1   MAEKEAEQPKLNPQPPAVKLKPRRLKGHKDSTNCCIASPQNPHLIVTSGDDGFVCWFDLR 60
           MAEK+A +         +KLKPRRLKGH DST CCIAS +  HLIVTSGDDG VCWFDLR
Sbjct: 1   MAEKDATK---------LKLKPRRLKGHDDSTTCCIASRERSHLIVTSGDDGRVCWFDLR 51

Query: 61  CSDEAQLVMDVSTEAVVSLCFKPGKEDNIYVSSGKEINCFDVRLATAKWEPLESYNYNKE 120
           C DE +LVMDVS E V SLCFK G ED IYVSSGKEI CFDVRLA A+W+PLE+YNYNKE
Sbjct: 52  CPDEPRLVMDVSVEPVSSLCFKSGMEDMIYVSSGKEIKCFDVRLAAAQWKPLENYNYNKE 111

Query: 121 EINKVTCNSRSSFLAAADDSGEVKIIDIRQQCLHKTLRAGHTSICSSVEFLPWRSWEVIS 180
           EINKV CNS+SSFLAAADD+GEVKIIDI QQCL+KTLRAGHTSICS+VEFLPWRSWEVIS
Sbjct: 112 EINKVVCNSKSSFLAAADDNGEVKIIDIHQQCLYKTLRAGHTSICSTVEFLPWRSWEVIS 171

Query: 181 GGLDSALVWWDFSNGRHNKIANFG--NVSSSNAGQCYNPSFIHAIAVPETDMIDKLDKIC 238
           GGLDS L+ WDFS GR  K+ +F   +VSS  AG+C NP+F+HAIA+PE DM+DKLDKIC
Sbjct: 172 GGLDSMLMLWDFSKGRPYKVVDFATFDVSSGIAGRCVNPAFVHAIAIPEVDMLDKLDKIC 231

Query: 239 XXXX-XXXXXXXXXEAEIACMKSKGFSNSRKGSQSRPKQGSSTSNTDADQNGRRRLQLDY 297
                         E E+A  KSK  SNSRKGS SR K GSS+SNTDADQNG++RL LDY
Sbjct: 232 AVARGDGAIDVINIETEMAATKSKSSSNSRKGSHSRSKDGSSSSNTDADQNGKKRLHLDY 291

Query: 298 TLGGHNAAVSSLEFSLFGERGKFLVSGGNDRLVKVWNWSSYRDAGISDGNNDILHLNIG- 356
           TLGGH AAVSSL FSLFGERGKFL+SGGND+LVKVWN S Y DAG+SD NN+ +      
Sbjct: 292 TLGGHTAAVSSLAFSLFGERGKFLISGGNDKLVKVWNLSCYPDAGLSDDNNNNILHLNIE 351

Query: 357 VPQKVNCLCTTTADTDNLVVCDTSKTVKVYSVT 389
           VP+KVN LCTT+ADTDNLVVCDTSK VKVYS+T
Sbjct: 352 VPRKVNWLCTTSADTDNLVVCDTSKVVKVYSIT 384


>Glyma08g12410.1 
          Length = 363

 Score =  469 bits (1207), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/348 (71%), Positives = 277/348 (79%), Gaps = 12/348 (3%)

Query: 1   MAEKEAEQPKLNPQPPAVKLKPRRLKGHKDSTNCCIASPQNPHLIVTSGDDGFVCWFDLR 60
           MAEK+          P +KLKPRRLKGH DST CCIAS +  HLIVTSGDDG VCWFDLR
Sbjct: 1   MAEKDV---------PKLKLKPRRLKGHDDSTTCCIASRERSHLIVTSGDDGRVCWFDLR 51

Query: 61  CSDEAQLVMDVSTEAVVSLCFKPGKEDNIYVSSGKEINCFDVRLATAKWEPLESYNYNKE 120
           C D  QLVMDVS E V S CFK G ED IYVSSGKEI CFDVRLA A+W+PLE+YNYNKE
Sbjct: 52  CPDVPQLVMDVSVEPVSSFCFKSGMEDMIYVSSGKEIKCFDVRLAAAQWKPLENYNYNKE 111

Query: 121 EINKVTCNSRSSFLAAADDSGEVKIIDIRQQCLHKTLRAGHTSICSSVEFLPWRSWEVIS 180
           EINKV CNS+SSF+AAADD+GEVKIIDIRQQCL+KTLRAGHTSICS+VEFLPWRSWEVIS
Sbjct: 112 EINKVVCNSKSSFVAAADDNGEVKIIDIRQQCLYKTLRAGHTSICSTVEFLPWRSWEVIS 171

Query: 181 GGLDSALVWWDFSNGRHNKIANFG--NVSSSNAGQCYNPSFIHAIAVPETDMIDKLDKIC 238
           GGLDS L+ WDFS GR  K+ +F   +VSS  AG+C NP+F+HAIAVPE DM+DKLDKIC
Sbjct: 172 GGLDSMLMLWDFSKGRPYKVVDFATFDVSSGIAGRCVNPAFVHAIAVPEVDMLDKLDKIC 231

Query: 239 XXXX-XXXXXXXXXEAEIACMKSKGFSNSRKGSQSRPKQGSSTSNTDADQNGRRRLQLDY 297
                         E E+A  KSK  SNSRKGS SR K GSS+SNTDADQNG++RL L+Y
Sbjct: 232 AAARGDGAIDVINIETEMAATKSKSSSNSRKGSHSRSKDGSSSSNTDADQNGKKRLHLNY 291

Query: 298 TLGGHNAAVSSLEFSLFGERGKFLVSGGNDRLVKVWNWSSYRDAGISD 345
           TLGGH AAVSSL FSLFGERGKFL+SGGND+LVK+WNWS Y D G+SD
Sbjct: 292 TLGGHTAAVSSLAFSLFGERGKFLISGGNDKLVKIWNWSCYPDVGLSD 339