Miyakogusa Predicted Gene

Lj0g3v0154719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0154719.1 tr|A9S0J3|A9S0J3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_72978
,40.17,0.0000000000001,GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE
1,NULL,CUFF.9567.1
         (214 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g01660.1                                                       360   e-100
Glyma09g35700.1                                                       360   e-100

>Glyma12g01660.1 
          Length = 368

 Score =  360 bits (924), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/217 (82%), Positives = 192/217 (88%), Gaps = 12/217 (5%)

Query: 10  SC-RLLPYHVVADYEAEEDDRILDSDTTGQVLSRSQQWDNNIAAKIAEFTATFEKQALAF 68
           +C RLLPYHVVADYE EEDDRILDSDTTGQ+LSRSQQWDNNI AKIAEFTATFEKQALAF
Sbjct: 152 ACERLLPYHVVADYEEEEDDRILDSDTTGQMLSRSQQWDNNITAKIAEFTATFEKQALAF 211

Query: 69  NIISQKRNLGEFRSEERLMIEQALLQEEKRALM-----------AGREAHEAKLRMAAMY 117
           NII+QKR LGEFRSEERLMIEQALLQEEKRA             AGREAHEAKLRMAAM+
Sbjct: 212 NIITQKRGLGEFRSEERLMIEQALLQEEKRAFYELRAEIESREKAGREAHEAKLRMAAMF 271

Query: 118 QAEQARAESHSHAEMMSRAPIRGSALGSQGSGDMMGHDMGEQDQGGHPGDMMNGWGNNAH 177
           QAEQARA+  SHAEMMSR P+RGSALGSQG+  ++GHDMGEQDQGG+PG+M+NGWGNN  
Sbjct: 272 QAEQARADLQSHAEMMSRVPMRGSALGSQGNDIVIGHDMGEQDQGGNPGEMINGWGNNTQ 331

Query: 178 REEKEPSEDFLNDEAENGDTGTQDGWREVGEFDLNAR 214
           R+EKEPSEDFLNDEAENGD GTQDGWREVGEFDLNAR
Sbjct: 332 RDEKEPSEDFLNDEAENGDIGTQDGWREVGEFDLNAR 368


>Glyma09g35700.1 
          Length = 378

 Score =  360 bits (923), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/217 (82%), Positives = 193/217 (88%), Gaps = 12/217 (5%)

Query: 10  SC-RLLPYHVVADYEAEEDDRILDSDTTGQVLSRSQQWDNNIAAKIAEFTATFEKQALAF 68
           +C RLLPYHVVADYE EEDDRILDSDTTGQ+LSRSQQWDNNI AKIAEFTATFEKQALAF
Sbjct: 162 ACERLLPYHVVADYEEEEDDRILDSDTTGQMLSRSQQWDNNITAKIAEFTATFEKQALAF 221

Query: 69  NIISQKRNLGEFRSEERLMIEQALLQEEKRALM-----------AGREAHEAKLRMAAMY 117
           NII+QKR LGEFRSEERLMIEQALLQEEKRA             AGREAHEAKLRMAAM+
Sbjct: 222 NIITQKRGLGEFRSEERLMIEQALLQEEKRANYELRAEIESREKAGREAHEAKLRMAAMF 281

Query: 118 QAEQARAESHSHAEMMSRAPIRGSALGSQGSGDMMGHDMGEQDQGGHPGDMMNGWGNNAH 177
           QAEQARA+  SHAEMMSRAP+RGSALGSQG+  ++GHDMGEQDQ G+PG+M+NGWGNN  
Sbjct: 282 QAEQARADLQSHAEMMSRAPMRGSALGSQGNDIVIGHDMGEQDQAGNPGEMINGWGNNTQ 341

Query: 178 REEKEPSEDFLNDEAENGDTGTQDGWREVGEFDLNAR 214
           R+EKEPSEDFLNDEAENGDTGTQDGWREVGEFDLNAR
Sbjct: 342 RDEKEPSEDFLNDEAENGDTGTQDGWREVGEFDLNAR 378